[gmx-users] Regarding installation in gpu

Mark Abraham mark.j.abraham at gmail.com
Wed Jun 15 16:27:18 CEST 2016


Hi,

There's no GNU compiler that can install 4.6.2 that cannot install 5.1 ;-)
And if there was, you surely want all the bug fixes leading to 4.6.7...

Mark

On Wed, Jun 15, 2016 at 4:10 PM SOUVIK MONDAL <m.souvik at iitkgp.ac.in> wrote:

> The gnu compiler version is low that is why I am trying to install version
> 4.6.2.
> "Maybe need administrative privileges."
> Does it mean that I need root permission?
> ----- Original Message -----
> From: "Justin Lemkul" <jalemkul at vt.edu>
> To: gmx-users at gromacs.org
> Sent: Wednesday, June 15, 2016 4:57:07 PM
> Subject: Re: [gmx-users] Regarding installation in gpu
>
>
>
> On 6/15/16 7:06 AM, SOUVIK MONDAL wrote:
> > Hi
> >   I got the following error during gromacs4.6.2  installation(parallel
> ver)  in gpu.
> >
> > Error :
> > Install the project...
> > -- Install configuration: "Release"
> > CMake Error at cmake_install.cmake:44 (file):
> >   file cannot create directory: /usr/local/gromacs/share/gromacs.  Maybe
> need
> >   administrative privileges.
> >
> > Command used for the installation
> >
> > /home/thajari/Gromacs/cmake-3.5.2/bin/cmake .. -DGMX_GPU=ON
> -DCUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda -DGMX_BUILD_OWN_FFTW=ON
> -DGMX_PREFER_STATIC_LIBS=ON -DBUILD_SHARED_LIBS=OFF -DGMX_X11=OFF
> -DGMX_MPI=OFF
> >
> > make
> >
> > make install
> >
> > While performing make install the above error was coming.
> >
>
> "Maybe need administrative privileges."
>
> This means you're not allowed to install there without being admin/root.
>
> Perhaps the bigger question is why you're installing an ancient version of
> the code.
>
> -Justin
>
> --
> ==================================================
>
> Justin A. Lemkul, Ph.D.
> Ruth L. Kirschstein NRSA Postdoctoral Fellow
>
> Department of Pharmaceutical Sciences
> School of Pharmacy
> Health Sciences Facility II, Room 629
> University of Maryland, Baltimore
> 20 Penn St.
> Baltimore, MD 21201
>
> jalemkul at outerbanks.umaryland.edu | (410) 706-7441
> http://mackerell.umaryland.edu/~jalemkul
>
> ==================================================
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