[gmx-users] How to make a program run on the trajectory

Dan Gil dgilgmx at gmail.com
Mon Sep 19 00:13:53 CEST 2016


Hi Prasun,

Does your question have to do with reading the .trr format?

If you want, you could convert it into a friendlier format such as .gro.
Use gromacs trjconv to convert from .trr to .gro format.

Best Regards,

Dan

On Saturday, September 17, 2016, João Henriques <
joao.henriques.32353 at gmail.com> wrote:

> Dear Prasun,
>
> I am genuinely puzzled by your email. If taken literally, I'd have to
> assume that you are stating that you don't know how to feed the trajectory
> file as an argument to your programs, but that doesn't make any sense,
> given that you explicitly say that you coded the programs yourself. If you
> can code tools to run over binary files, such trivial matter can't be the
> problem here...
>
> Therefore, could you please state more specifically what is it that you
> can't accomplish? Please be more verbose as well, it should help.
>
> Thank you,
> João
>
> On Fri, Sep 16, 2016 at 8:23 PM, prasun kumar <prasun30 at gmail.com
> <javascript:;>> wrote:
>
> > Hello
> >
> > I have written some programs in Fortran and PERL.
> > Now I want to make them run on a trajectory file (.trr).
> > Can some body guide me for the same. I believe that it must be available
> on
> > net. However, I was not able to find so.
> >
> > Thanx in advance.
> >
> > Regards
> > Prasun
> >
> > PRASUN (ASHOKA)
> > Desire + stability = Resolution
> > Resolution + Hard work = Success
> > --
> > Gromacs Users mailing list
> >
> > * Please search the archive at http://www.gromacs.org/
> > Support/Mailing_Lists/GMX-Users_List before posting!
> >
> > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >
> > * For (un)subscribe requests visit
> > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> > send a mail to gmx-users-request at gromacs.org <javascript:;>.
> >
> --
> Gromacs Users mailing list
>
> * Please search the archive at http://www.gromacs.org/
> Support/Mailing_Lists/GMX-Users_List before posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org <javascript:;>.


More information about the gromacs.org_gmx-users mailing list