[gmx-users] Insertion of Ion-channels onto the membrane using g_membed with Amber force field
mark.j.abraham at gmail.com
Wed Dec 6 09:32:01 CET 2017
I'd start by considering the options at
On Wed, Dec 6, 2017, 6:12 PM Dhaniram Mahato <bioinfojsr at gmail.com> wrote:
> Thanks for the reply.
> For all-atom Amber ff, Should I change the neighbor list value or change in
> the cut-off for VdW interactions. As the side-chain hydrogen atoms might be
> clashing with the lipid atoms and thus producing many LINCS warning.
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