[gmx-users] Per lipid area for heterogeneous membrane

Мижээ Батсайхан b.mijiddorj at gmail.com
Thu Mar 2 06:34:04 CET 2017


Dear Justin,

Thank you very much for your reply. I have a further question about
GridMAT-MD tool. Is it possible to use in case with different upper leaflet
and lower leaflet? In the manual, GridMAT-MD tool needs the leaflet tails
face towards.

Best regards,
Mijee

On 3/1/17 8:56 AM, ????? ????????? wrote:
> > Dear gmx users,
> >
> > Hello, My simulation system consists of severil different type of
> membrane
> > models including ergosterols. I want to analysis per lipid area for this
> > system. How can I calculate the area? Please advice me.
> >
> > Can I use GridMAT-MD tool? If it is possible, how I do.
> >
>
> Yes, and we provide an example of a mixed bilayer in section 7.2 of our
> PDF manual.
>
> -Justin
>
> --
> ==================================================
>
> Justin A. Lemkul, Ph.D.
> Ruth L. Kirschstein NRSA Postdoctoral Fellow
>
> Department of Pharmaceutical Sciences
> School of Pharmacy
> Health Sciences Facility II, Room 629
> University of Maryland, Baltimore
> 20 Penn St.
> Baltimore, MD 21201
>
> jalemkul at outerbanks.umaryland.edu | (410) 706-7441
> http://mackerell.umaryland.edu/~jalemkul
>
> ==================================================
>


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