[gmx-users] Per lipid area for heterogeneous membrane

Björn Sommer bjoern at CELLmicrocosmos.org
Thu Mar 2 10:20:36 CET 2017


Dear Mijee,

alternatively to GridMat, you might also want to have a look at our
APL at Voro:

http://aplvoro.org

It provides a GUI, so you can easily import your PDB file into the tool
and analyze the APL, thickness and neighborhood based on Voronoi
tesselation. Later, you can also import trajectory files and analyze
them over time. The publication reference you will also find at the website.

Cheers,
Bjorn
 


More information about the gromacs.org_gmx-users mailing list