[gmx-users] FAD parameters in CHRAMm36 ff

Vytautas Rakeviius vytautas1987 at yahoo.com
Fri Mar 31 10:57:24 CEST 2017


I think you should use cgenff for FAD in such case. They are compatible and can by used together.
 

    On Friday, March 31, 2017 9:29 AM, Amir Zeb <zebamir85 at gmail.com> wrote:
 

 Hello Folks,

I want to simulate a protein where FAD is included as co-factor. I will use
CHARMm36 ff but I don't know the residue ID for FAD in this particular
forcefield. Anyone please let me know by which name FAD is represented in
CHARMm36 ff?

Thanks in advance!

~Amir
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