[gmx-users] topogen usage

paul buscemi pbuscemi at q.com
Fri Aug 3 01:36:48 CEST 2018

Dear Users,

Although topogen is a bit dated it seems to work well for ‘smaller’ polymers -500 atoms- and builds a single file itp. However in making a file for nylon 12 1000 atoms , a ‘central’ itp was create and separate files were made for section_dihedrals, section_bonds etc.   Are these to be included as you would an itp,  or does the itp find them automatically ?


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