August 2018 Archives by date

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Starting: Wed Aug 1 01:38:45 CEST 2018
Ending: Fri Aug 31 23:28:22 CEST 2018
Messages: 387

[gmx-users] zig-zag stacking Dan Gil
[gmx-users] ndx file with frames Dan Gil
[gmx-users] zig-zag stacking Lakshman Ji Verma
[gmx-users] non-global thermostatting Alex
[gmx-users] Issue with regression test. Raymond Arter
[gmx-users] Problem with Rescaling of the COM kai.exner at alumni.uni-ulm.de
[gmx-users] zig-zag stacking Nagasree Garapati
[gmx-users] ?==?utf-8?q? segmentation fault (core?=?==?utf-8?q? dumped) error with gmx confrm Jahn Nitschke
[gmx-users] Rigid methane molecule using virtual sites (4fdn) construction Ubaya Higgoda
[gmx-users] question about the center of mass motion removal madisonw at zju.edu.cn
[gmx-users] question about the center of mass motion removal Justin Lemkul
[gmx-users] My Email Marcelo Molinatti Semprún
[gmx-users] topology for bilayer graphene oxide RAHUL SURESH
[gmx-users] Inconsistency in user input: Atila Petrosian
[gmx-users] Inconsistency in user input: Atila Petrosian
[gmx-users] Inconsistency in user input: Mark Abraham
[gmx-users] Simulating crystal structures Momin Ahmad
[gmx-users] topology for bilayer graphene oxide Alex
[gmx-users] topogen usage paul buscemi
[gmx-users] Molecules in micelles Anjana Jayasinghe
[gmx-users] constant pressure in NPT simulation Lucia Mydlova
[gmx-users] constant pressure in NPT simulation Paul bauer
[gmx-users] constant pressure in NPT simulation Alex
[gmx-users] constant pressure in NPT simulation Quyen V. Vu
[gmx-users] Question about water insertion G R
[gmx-users] GROMACS Installation error on domdec.cpp 郭聪
[gmx-users] GROMACS Installation error on domdec.cpp Benson Muite
[gmx-users] Question about water insertion Kevin Boyd
[gmx-users] constant pressure in NPT simulation Justin Lemkul
[gmx-users] topogen usage Justin Lemkul
[gmx-users] mdrun stopped without error Atila Petrosian
[gmx-users] Qmmm rose rahmani
[gmx-users] Calculation for number of ions Archana Sonawani-Jagtap
[gmx-users] Calculation for number of ions Justin Lemkul
[gmx-users] Calculation for number of ions Abhishek Acharya
[gmx-users] GPU performance RAHUL SURESH
[gmx-users] mdrun stopped without error RAHUL SURESH
[gmx-users] GPU performance Justin Lemkul
[gmx-users] Gromacs installation to do coupled QMMM with Gaussian Maryam Kowsar
[gmx-users] Qmmm (rose rahmani) Groenhof, Gerrit
[gmx-users] Qmmm (rose rahmani) rose rahmani
[gmx-users] Simulating crystal structures Dallas Warren
[gmx-users] mdrun stopped without error Mark Abraham
[gmx-users] mdrun stopped without error Alex
[gmx-users] mdrun stopped without error Mark Abraham
[gmx-users] gmx helix error reg. Vishwambhar Bhandare
[gmx-users] msd Eric Smoll
[gmx-users] Gromacs installation to do coupled QMMM with Gaussian (Maryam Kowsar) Groenhof, Gerrit
[gmx-users] Qmmm (rose rahmani) Groenhof, Gerrit
[gmx-users] constant pressure in NPT simulation Lucia Mydlova
[gmx-users] Qmmm (rose rahmani) Rose
[gmx-users] constant pressure in NPT simulation Alex
[gmx-users] constant pressure in NPT simulation Justin Lemkul
[gmx-users] constant pressure in NPT simulation Alex
[gmx-users] Qmmm (rose rahmani) (Rose) Groenhof, Gerrit
[gmx-users] Qmmm (rose rahmani) (Rose) rose rahmani
[gmx-users] umbrella pulling, pullx vs gmx distance Joe Wu
[gmx-users] zig-zag stacking Lakshman Ji Verma
[gmx-users] Simulating crystal structures Lakshman Ji Verma
[gmx-users] Too few cells to run on multiple cores Adrian Devitt-Lee
[gmx-users] periodic-molecules = yes and movie Alex
[gmx-users] Too few cells to run on multiple cores Szilárd Páll
[gmx-users] periodic-molecules = yes and movie Justin Lemkul
[gmx-users] Issue with regression test. Szilárd Páll
[gmx-users] gromacs with mps Szilárd Páll
[gmx-users] gromacs with mps Szilárd Páll
[gmx-users] GMXRC removes trailing colon from existing MANPATH Szilárd Páll
[gmx-users] GMXRC removes trailing colon from existing MANPATH Szilárd Páll
[gmx-users] periodic-molecules = yes and movie Alex
[gmx-users] NVIDIA CUDA Alanine Scanning Szilárd Páll
[gmx-users] NVIDIA CUDA Alanine Scanning Szilárd Páll
[gmx-users] Cannot compute velocity of COM of a group of atoms ARNAB MUKHERJEE
[gmx-users] Enthalpy calculation in NPT ensemble Pelin S Bulutoglu
[gmx-users] GROMACS 2018.2 mdrun GPU Assertion failed: Condition: cudaSuccess == cudaPeekAtLastError() Jia Hong
[gmx-users] GROMACS 2018.2 mdrun GPU Assertion failed: Condition: cudaSuccess == cudaPeekAtLastError() Jia Hong
[gmx-users] residue not found abhisek Mondal
[gmx-users] residue not found Soham Sarkar
[gmx-users] residue not found Justin Lemkul
[gmx-users] Cannot compute velocity of COM of a group of atoms Justin Lemkul
[gmx-users] periodic-molecules = yes and movie Justin Lemkul
[gmx-users] Cannot compute velocity of COM of a group of atoms ARNAB MUKHERJEE
[gmx-users] Cannot compute velocity of COM of a group of atoms Justin Lemkul
[gmx-users] Errors while trying to install GROMACS-2018 Lovuit CHEN
[gmx-users] residue not found abhisek Mondal
[gmx-users] residue not found Soham Sarkar
[gmx-users] high load imbalance in GMX5.1 using MARTINI FF Linda Song
[gmx-users] Question about relation among couple-moltype , couple-lambda0 and couple-lambda1 parameter in free energy calculation. 김현준
[gmx-users] make_ndx hosein geraili
[gmx-users] force/time application for pull Rakesh Mishra
[gmx-users] Errors while trying to install GROMACS-2018 Szilárd Páll
[gmx-users] high load imbalance in GMX5.1 using MARTINI FF Szilárd Páll
[gmx-users] high load imbalance in GMX5.1 using MARTINI FF Szilárd Páll
[gmx-users] force/time application for pull Justin Lemkul
[gmx-users] Structure of polyvinyltoluene Harrisson, Genevieve
[gmx-users] Structure of polyvinyltoluene paul buscemi
[gmx-users] Protein-Ligand in bilayer RAHUL SURESH
[gmx-users] Protein-Ligand in bilayer Abhishek Acharya
[gmx-users] Center to center distance in cylindrical micelles Shan Jayasinghe
[gmx-users] Protein-Ligand in bilayer RAHUL SURESH
[gmx-users] Protein-Ligand in bilayer Abhishek Acharya
[gmx-users] Protein-Ligand in bilayer RAHUL SURESH
[gmx-users] Large differences in calculated and experimental relative hydration free energy. Abhishek Acharya
[gmx-users] Protein-Ligand in bilayer Abhishek Acharya
[gmx-users] GROMACS 2018.2 mdrun GPU Assertion failed: Condition: cudaSuccess == cudaPeekAtLastError() Mahmood Naderan
[gmx-users] Using multiple GPU's paul buscemi
[gmx-users] Using multiple GPU's Kevin Boyd
[gmx-users] Research Programmer Positions Available João Ribeiro
[gmx-users] Using multiple GPU's paul buscemi
[gmx-users] Protein-Ligand in bilayer Mark Abraham
[gmx-users] Large differences in calculated and experimental relative hydration free energy. Mark Abraham
[gmx-users] Center to center distance in cylindrical micelles Mark Abraham
[gmx-users] Using multiple GPU's Mark Abraham
[gmx-users] Cannot compute velocity of COM of a group of atoms Mark Abraham
[gmx-users] GROMACS 2018.2 mdrun GPU Assertion failed: Condition: cudaSuccess == cudaPeekAtLastError() Mark Abraham
[gmx-users] Center to center distance in cylindrical micelles Mark Abraham
[gmx-users] Protein-Ligand in bilayer RAHUL SURESH
[gmx-users] GROMACS 2018.2 mdrun GPU Assertion failed: Condition: cudaSuccess == cudaPeekAtLastError() Jia Hong
[gmx-users] Using multiple GPU's paul buscemi
[gmx-users] Center to center distance in cylindrical micelles Shan Jayasinghe
[gmx-users] Related to g_enemat command ISHRAT JAHAN
[gmx-users] Using multiple GPU's Mark Abraham
[gmx-users] Related to g_enemat command Mark Abraham
[gmx-users] Large differences in calculated and experimental relative hydration free energy. Abhishek Acharya
[gmx-users] Related to g_enemat command ISHRAT JAHAN
[gmx-users] RDF calculations for certain atoms in a polymer Mahsa
[gmx-users] periodic-molecules = yes and movie Alex
[gmx-users] RDF calculations for certain atoms in a polymer Mark Abraham
[gmx-users] Related to g_enemat command Mark Abraham
[gmx-users] Center to center distance in cylindrical micelles Mark Abraham
[gmx-users] RDF calculations for certain atoms in a polymer Mark Abraham
[gmx-users] RDF calculations for certain atoms in a polymer Mahsa
[gmx-users] Center to center distance in cylindrical micelles paul buscemi
[gmx-users] Center to center distance in cylindrical micelles Shan Jayasinghe
[gmx-users] Center to center distance in cylindrical micelles Mark Abraham
[gmx-users] No default Ryckaert-Bell. types Baolin Huang
[gmx-users] Simulations with SWM4-DP water model in non PBC Chi Yuen Pak
[gmx-users] Protein-Ligand in bilayer RAHUL SURESH
[gmx-users] Protein-Ligand in bilayer Mark Abraham
[gmx-users] FW: Binding cavity analysis Ullmann, Thomas
[gmx-users] Binding cavity analysis Ullmann, Thomas
[gmx-users] Center to center distance in cylindrical micelles Shan Jayasinghe
[gmx-users] Simulations with SWM4-DP water model in non PBC David van der Spoel
[gmx-users] refcoord-scaling=com kai.exner at alumni.uni-ulm.de
[gmx-users] Protein-Ligand in bilayer RAHUL SURESH
[gmx-users] refcoord-scaling=com Mark Abraham
[gmx-users] RDF calculations for certain atoms in a polymer Dallas Warren
[gmx-users] CGMD fixing PBC effect Nikhil Maroli
[gmx-users] force/time application for pull Rakesh Mishra
[gmx-users] 回覆︰ Simulations with SWM4-DP water model in non PBC Chi Yuen Pak
[gmx-users] force/time application for pull Mark Abraham
[gmx-users] RDF calculations for certain atoms in a polymer Mahsa
[gmx-users] force/time application for pull Rakesh Mishra
[gmx-users] force/time application for pull Justin Lemkul
[gmx-users] force/time application for pull Mark Abraham
[gmx-users] RDF calculations for certain atoms in a polymer Mark Abraham
[gmx-users] Mixing rule between organic and inorganic units Baolin Huang
[gmx-users] GROMACS 2018.2 mdrun GPU Assertion failed: Condition: cudaSuccess == cudaPeekAtLastError() Szilárd Páll
[gmx-users] Mixing rule between organic and inorganic units Mark Abraham
[gmx-users] Mixing rule between organic and inorganic units Mark Abraham
[gmx-users] 回复:Re: Mixing rule between organic and inorganic units Baolin Huang
[gmx-users] 回复:Re: Mixing rule between organic and inorganic units Justin Lemkul
[gmx-users] 回复:Re: 回复:Re: Mixing rule between organic and inorganic units Baolin Huang
[gmx-users] 回复:Re: 回复:Re: Mixing rule between organic and inorganic units Justin Lemkul
[gmx-users] Gromacs 2018 support Radeon GPU? 김나연
[gmx-users] 回复:Re: 回复:Re: Mixing rule between organic and inorganic units Mark Abraham
[gmx-users] Gromacs 2018 support Radeon GPU? Mark Abraham
[gmx-users] trjconv (File input/output error) Andrew Bostick
[gmx-users] 回覆︰ Simulations with SWM4-DP water model in non PBC David van der Spoel
[gmx-users] trjconv (File input/output error) David van der Spoel
[gmx-users] No default Ryckaert-Bell. types Dan Gil
[gmx-users] RDF calculations for certain atoms in a polymer Mahsa
[gmx-users] Umbrella Sampling: At diff force constant Md Masrul Huda
[gmx-users] No default Ryckaert-Bell. types Baolin Huang
[gmx-users] 回覆︰回覆︰ Simulations with SWM4-DP water model in non PBC Chi Yuen Pak
[gmx-users] How to search efficiently the mailing list. Sergio Perez
[gmx-users] new threadripper Harry Mark Greenblatt
[gmx-users] Enthalpy calculation in NPT ensemble Pelin S Bulutoglu
[gmx-users] Enthalpy calculation in NPT ensemble David van der Spoel
[gmx-users] Enthalpy calculation in NPT ensemble Pelin S Bulutoglu
[gmx-users] GROMACS 2018.2 mdrun GPU Assertion failed: Condition: cudaSuccess == cudaPeekAtLastError() Jia Hong
[gmx-users] GTP Mahdi Sobati Nezhad
[gmx-users] .gro file hosein geraili
[gmx-users] Overlapping frames within one .xtc Sergio Perez
[gmx-users] Overlapping frames within one .xtc Paul bauer
[gmx-users] Coordinates transformation Yasser Almeida Hernández
[gmx-users] Overlapping frames within one .xtc Sergio Perez
[gmx-users] Overlapping frames within one .xtc Mark Abraham
[gmx-users] No default Ryckaert-Bell. types Justin Lemkul
[gmx-users] How to search efficiently the mailing list. Justin Lemkul
[gmx-users] GTP Justin Lemkul
[gmx-users] Coordinates transformation Justin Lemkul
[gmx-users] Combining two pdb RAHUL SURESH
[gmx-users] Combining two pdb Justin Lemkul
[gmx-users] Negative tilt factor Maureen M Kitheka
[gmx-users] Test particle insertion in designated coordinates gives Segmentation fault Zheng, Lingru
[gmx-users] GTP Mahdi Sobati Nezhad
[gmx-users] GTP Justin Lemkul
[gmx-users] Estimating the required computer resource for a MD project Alex
[gmx-users] thread-MPI compatibility requirement? Jost, Gabriele (ARC-TNC)[Supersmith]
[gmx-users] thread-MPI compatibility requirement? Kevin Boyd
[gmx-users] Index oh dihedral for dPCA mfat290 at yahoo.com
[gmx-users] Question regarding dihedral angle parameters Upendra N
[gmx-users] Rigid four atom molecule using LINCS Philip Loche
[gmx-users] Question regarding dihedral angle parameters Justin Lemkul
[gmx-users] Question regarding dihedral angle parameters Upendra N
[gmx-users] Question regarding dihedral angle parameters Justin Lemkul
[gmx-users] Question regarding dihedral angle parameters Upendra N
[gmx-users] PCA analysis Ashu Sharma
[gmx-users] Center to center distance in cylindrical micelles Shan Jayasinghe
[gmx-users] Scaling factor on Sigma and epsilon hosein geraili
[gmx-users] how to use backup files as an input file? mmousivand93
[gmx-users] Enthalpy calculation in NPT ensemble David van der Spoel
[gmx-users] Getting ligand's topology Mahdi Sobati Nezhad
[gmx-users] Getting ligand's topology RAHUL SURESH
[gmx-users] Getting ligand's topology Mahdi Sobati Nezhad
[gmx-users] Getting ligand's topology RAHUL SURESH
[gmx-users] Getting ligand's topology Mahdi Sobati Nezhad
[gmx-users] Getting ligand's topology RAHUL SURESH
[gmx-users] Step Four: Adding Ions Maximiliano Sebastián Castillo
[gmx-users] Step Four: Adding Ions RAHUL SURESH
[gmx-users] Step Four: Adding Ions RAHUL SURESH
[gmx-users] Getting ligand's topology Justin Lemkul
[gmx-users] how to use backup files as an input file? Kevin Boyd
[gmx-users] Center to center distance in cylindrical micelles Dallas Warren
[gmx-users] Getting ligand's topology RAHUL SURESH
[gmx-users] Getting ligand's topology Mahdi Sobati Nezhad
[gmx-users] lipid relaxation time Neda Rafiee
[gmx-users] force/time application for pull Rakesh Mishra
[gmx-users] Combining position restraints with Parrinello-Rahman pressure coupling leads to instabilities Naba
[gmx-users] Combining position restraints with Parrinello-Rahman pressure coupling leads to instabilities Justin Lemkul
[gmx-users] Getting ligand's topology Justin Lemkul
[gmx-users] [Install error] What can I do this situation? 김나연
[gmx-users] [Install error] What can I do this situation? Szilárd Páll
[gmx-users] gmx clustsize Pandya, Akash
[gmx-users] gmx clustsize Justin Lemkul
[gmx-users] Center to center distance in cylindrical micelles Antonio Baptista
[gmx-users] Combining position restraints with Parrinello-Rahman pressure coupling leads to instabilities Naba
[gmx-users] Density of POPC membrane and lateral diffusion Smith, Iris
[gmx-users] Density of POPC membrane and lateral diffusion Kevin Boyd
[gmx-users] minimization_aborted Bratin Kumar Das
[gmx-users] Step Four: Adding Ions Bratin Kumar Das
[gmx-users] Getting ligand's topology Bratin Kumar Das
[gmx-users] minimization_aborted RAHUL SURESH
[gmx-users] minimization_aborted Bratin Kumar Das
[gmx-users] minimization_aborted Alex
[gmx-users] Residue not found in topology Amir Zeb
[gmx-users] minimization_aborted RAHUL SURESH
[gmx-users] Residue not found in topology Bratin Kumar Das
[gmx-users] Residue not found in topology Bratin Kumar Das
[gmx-users] minimization_aborted Bratin Kumar Das
[gmx-users] Residue not found in topology Justin Lemkul
[gmx-users] minimization_aborted Justin Lemkul
[gmx-users] Combining position restraints with Parrinello-Rahman pressure coupling leads to instabilities Justin Lemkul
[gmx-users] minimization_aborted RAHUL SURESH
[gmx-users] Changing Sigma in force field hosein geraili
[gmx-users] Getting ligand's topology Mahdi Sobati Nezhad
[gmx-users] Getting ligand's topology Justin Lemkul
[gmx-users] Getting ligand's topology Mahdi Sobati Nezhad
[gmx-users] Getting ligand's topology Justin Lemkul
[gmx-users] minimization_aborted Alex
[gmx-users] umbrella pulling, pullx vs gmx distance Joe Wu
[gmx-users] gmx_dipoles Mtot and aver difference Raag Saluja
[gmx-users] Residue not found in topology Amir Zeb
[gmx-users] specbonds Momin Ahmad
[gmx-users] SWM4-NDP Simulation Julian Müller
[gmx-users] residue-ligand interaction energy using rerun option in mdrun vijayakumar gosu
[gmx-users] Residue not found in topology Bratin Kumar Das
[gmx-users] Residue not found in topology Justin Lemkul
[gmx-users] Residue not found in topology Justin Lemkul
[gmx-users] residue-ligand interaction energy using rerun option in mdrun Justin Lemkul
[gmx-users] SWM4-NDP Simulation Justin Lemkul
[gmx-users] specbonds Justin Lemkul
[gmx-users] Residue not found in topology Amir Zeb
[gmx-users] Residue not found in topology Justin Lemkul
[gmx-users] gromacs.org_gmx-users Digest, Vol 172, Issue 71 vijayakumar gosu
[gmx-users] GROMACS 2018.3 patch release available Paul bauer
[gmx-users] Feedback wanted - mdp option for preparation vs production Mark Abraham
[gmx-users] gmx msd and standard deviation for each dt Sevahn Vorperian
[gmx-users] residue-ligand interaction energy using rerun option in mdrun Justin Lemkul
[gmx-users] Feedback wanted - mdp option for preparation vs production Dallas Warren
[gmx-users] gmx msd and standard deviation for each dt David van der Spoel
[gmx-users] gmx_dipoles Mtot and aver difference David van der Spoel
[gmx-users] Feedback wanted - mdp option for preparation vs production Victor Rosas Garcia
[gmx-users] Feedback wanted - mdp option for preparation vs production Mark Abraham
[gmx-users] Feedback wanted - mdp option for preparation vs production Justin Lemkul
[gmx-users] Feedback wanted - mdp option for preparation vs production Paul bauer
[gmx-users] Feedback wanted - mdp option for preparation vs production Szilárd Páll
[gmx-users] Feedback wanted - mdp option for preparation vs production Mark Abraham
[gmx-users] Feedback wanted - mdp option for preparation vs production Mark Abraham
[gmx-users] Feedback wanted - mdp option for preparation vs production Szilárd Páll
[gmx-users] Feedback wanted - mdp option for preparation vs production Mark Abraham
[gmx-users] Gromacs to Amber Akshay
[gmx-users] obtaining series of data from same run and gen-vel Felix Y Yang
[gmx-users] Qm/mm rose rahmani
[gmx-users] Qm/mm Benson Muite
[gmx-users] Qm/mm rose rahmani
[gmx-users] gmx_dipoles Mtot and aver difference Raag Saluja
[gmx-users] Qm/mm Justin Lemkul
[gmx-users] gmx_dipoles Mtot and aver difference Justin Lemkul
[gmx-users] Qm/mm Albert
[gmx-users] How to center my complex in the box? mmousivand93
[gmx-users] How to center my complex in the box? ISHRAT JAHAN
[gmx-users] gmx_dipoles Mtot and aver difference Raag Saluja
[gmx-users] Qm/mm rose rahmani
[gmx-users] Qm/mm Alex
[gmx-users] gmx_dipoles Mtot and aver difference Justin Lemkul
[gmx-users] How to evaluate the Hbond and non-bonded interactions between ligand-receptor mmousivand93
[gmx-users] How to evaluate the Hbond and non-bonded interactions between ligand-receptor Quyen Vu Van
[gmx-users] potential energy per molecules or per mole Dhawal Shah
[gmx-users] potential energy per molecules or per mole Alex
[gmx-users] How to center my complex in the box? Bratin Kumar Das
[gmx-users] potential energy per molecules or per mole Dhawal Shah
[gmx-users] potential energy per molecules or per mole Alex
[gmx-users] Can I calculate thermal conductivity of a material in Gromacs? Tong Li
[gmx-users] Can I calculate thermal conductivity of a material in Gromacs? David van der Spoel
[gmx-users] Can I calculate thermal conductivity of a material in Gromacs? Alex
[gmx-users] force/time application for pull Rakesh Mishra
[gmx-users] Changing Sigma in force field Mark Abraham
[gmx-users] GMXRC removes trailing colon from existing MANPATH Peter Kroon
[gmx-users] GMXRC removes trailing colon from existing MANPATH Szilárd Páll
[gmx-users] GMXRC removes trailing colon from existing MANPATH Szilárd Páll
[gmx-users] free energy calculation. neelam wafa
[gmx-users] GROMACS result not matching with my code Kumari Shilpa
[gmx-users] [EXT] Re: Density of POPC membrane and lateral diffusion Smith, Iris
[gmx-users] Calculate and print ALL distances between atoms A and B from structure file (i.e. not over time), with detailed information Javier Luque Di Salvo
[gmx-users] Calculate and print ALL distances between atoms A and B from structure file (i.e. not over time), with detailed information Justin Lemkul
[gmx-users] Parametrization matters Disraeli Cavalcante Araujo Vasconcelos UFC
[gmx-users] protein dna pulling abhisek Mondal
[gmx-users] re-How to evaluate the Hbond and non-bonded interactions between ligand-receptor mmousivand93
[gmx-users] Fwd: free energy calculation. neelam wafa
[gmx-users] Fwd: free energy calculation. Dallas Warren
[gmx-users] Turing GPUs Dallas Warren
[gmx-users] rotation of atoms by more than 90 degrees & LINCS Warnings sagar bathla
[gmx-users] rerun doesn't calculate Coulomb & LJ interactions between groups Irem Altan
[gmx-users] rerun doesn't calculate Coulomb & LJ interactions between groups Justin Lemkul
[gmx-users] Heterogeneous GPU cluster question? Smith, Micholas D.
[gmx-users] Interaction energy with Reaction-field Caceres Delpiano J.
[gmx-users] Intramolecular interaction i don't know how to restraint by add intramol interaction to .top hoangtung9597
[gmx-users] Joining two simulation box into a big box Joydeep Munshi
[gmx-users] Values of coul_lambda for free energy calculation. neelam wafa
[gmx-users] Values of coul_lambda for free energy calculation. neelam wafa
[gmx-users] Joining two simulation box into a big box Dallas Warren
[gmx-users] Values of coul_lambda for free energy calculation. Dallas Warren
[gmx-users] free energy of complex system abhisek Mondal
[gmx-users] free energy of complex system abhisek Mondal
[gmx-users] restrain ligand in free energy. Tùng Hoàng
[gmx-users] rotation of atoms by more than 90 degrees & LINCS Warnings Dan Gil
[gmx-users] gromacs.org_gmx-users Digest, Vol 172, Issue 89 sagar bathla
[gmx-users] free energy of complex system Dallas Warren
[gmx-users] DNA simulation and choice of temperature coupling groups Athina Meletiou
[gmx-users] gromacs.org_gmx-users Digest, Vol 172, Issue 89 Dan Gil
[gmx-users] Gromacs 2018.3 install warning Du, Yu
[gmx-users] Gromacs 2018.3 install warning Paul bauer
[gmx-users] restrain ligand in free energy. Bratin Kumar Das
[gmx-users] Gromacs 2018.3 install warning Du, Yu
[gmx-users] restrain ligand in free energy. hoangtung9597
[gmx-users] PDB code Nick Johans
[gmx-users] PDB code Nick Johans
[gmx-users] [BULK][EXT] Re: PDB code Smith, Iris
[gmx-users] Heterogeneous GPU cluster question? Szilárd Páll
[gmx-users] [BULK][EXT] Re: PDB code Nick Johans
[gmx-users] [BULK][EXT] Re: PDB code Justin Lemkul
[gmx-users] [BULK][EXT] Re: PDB code Nick Johans
[gmx-users] [BULK][EXT] Re: PDB code Justin Lemkul
[gmx-users] DNA simulation and choice of temperature coupling groups Dallas Warren
[gmx-users] free energy of restraints asaffarhi at post.tau.ac.il
[gmx-users] (no subject) Rakesh Mishra
[gmx-users] Documentation on gmx densorder? Smith, Micholas D.
[gmx-users] GROMACS XRD analysis Li, Shi
[gmx-users] Force Calculation through Pulling Samieegohar, Mohammadreza
[gmx-users] Syntax Error when Adding Ions to DNA/ligand complex Wahl, David M
[gmx-users] Syntax Error when Adding Ions to DNA/ligand complex Dallas Warren
[gmx-users] force/time application for pull Rakesh Mishra
[gmx-users] Documentation on gmx densorder? David van der Spoel
[gmx-users] (no subject) Rakesh Mishra
[gmx-users] (no subject) Rakesh Mishra
[gmx-users] Optimal pme grid Mahmood Naderan
[gmx-users] force/time application for pull Benson Muite
[gmx-users] Documentation on gmx densorder? Smith, Micholas D.
[gmx-users] (no subject) Mark Abraham
[gmx-users] (no subject) Rakesh Mishra
[gmx-users] force/time application for pull Rakesh Mishra
[gmx-users] (no subject) Rakesh Mishra
[gmx-users] bk3 water energy minimization potential shift Jo Jo
[gmx-users] Documentation on gmx densorder? Eric Smoll
[gmx-users] Drude polarization ff for Ca2+ and Mg2+ Xianchi Dong
[gmx-users] GROMACS 2018.x installation Gregory Poon

Last message date: Fri Aug 31 23:28:22 CEST 2018
Archived on: Fri Aug 31 23:28:23 CEST 2018

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