[gmx-users] CGMD fixing PBC effect

[Nikhil Maroli]

Dear experts,


I have a Coarse-grained simulation system where a dimer peptide is situated
on the surface of the lipid bilayer. Can anyone help me to solve the PBC
effect, I have tried with pbc mol, cluster and centring.

Here is the link for 200 frames and starting configuration.

Thanks in advance

https://drive.google.com/file/d/1OdqLZgsPewb6zrmoJ6UU4Eic4HFz7yX7/view?usp=sharing

-- 
Regards,
Nikhil Maroli