[gmx-users] GTP

[Mahdi Sobati Nezhad]

Excuse me I don't understand completely, I residue I see Gua and Ade. You
say I change Gua base with Ade base in the ATPs residue?!
What about my hydrogen bonds?!
Do my charges don't change?!

Thanks for your help

On Wed, 15 Aug 2018 16:00 Justin Lemkul, <jalemkul at vt.edu> wrote:

>
>
> On 8/15/18 3:05 AM, Mahdi Sobati Nezhad wrote:
> > hello
> > I'm working on a protein that contains GTP in its structure. I can't find
> > any force field that contains GTP's residue but I find a force field that
> > contains the ATPs residue! There is any way that I can convert ATP to
> GTP?!
> > Or any other idea?!
>
> Just replace the Ade base with Gua.
>
> -Justin
>
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> Justin A. Lemkul, Ph.D.
> Assistant Professor
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