[gmx-users] gmx msd and standard deviation for each dt

Sevahn Vorperian kayaneh at gmail.com
Fri Aug 24 00:27:40 CEST 2018

Dear All,

I have a ring of carbons whose MSD over my simulation time I need to track.

I understand that each MSD datapoint that gmx msd outputs is an average
over all the carbons in the ring, but I also need the corresponding
standard deviation of each average corresponding to a time step.
Is there a way to accomplish this, as if I would run "gmx analyze" on each
step of "gmx msd"?

Thank you!

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