[gmx-users] dssp excutable-error

[Mark Abraham]

Hi,

Have you followed the advice in gmx help do_dssp about setting the
environment variables? Did you install the correct version of dssp?

Mark

On Mon, Nov 12, 2018 at 11:43 PM marzieh dehghan <dehghanmarzieh at gmail.com>
wrote:

> Dear all
> I installed dssp software on ubuntu version 12.04 in the /usr/local/bin,
> when I run the following command "*sudo find / -name dssp*" it showed the
> mentioned pathway, but when I apply the following comand "*gmx do_dssp -f
> xtc -s tpr -o xpm -sc xvg -tu ns*"
>
> I confronted to this error:
> *"failed to execute command: try specifying your dssp version with the -ver
> option" *
>
> please let me know how to solve this problem.
>
> Thanks in advances.
> Best wishes.
> Marzieh
> --
>
>
>
>
> *Marzieh DehghanPhD of BiochemistryInstitute of biochemistry and Biophysics
> (IBB)University of Tehran, Tehran- Iran.*
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