[gmx-users] Error bar for umbrella sampling?

Александр Лашков alashkov83 at gmail.com
Mon Jan 13 18:02:08 CET 2020


In pymbar package error estimate directly. Example usage this package for
umbrella sampling can be  found on github page for this package
Alexander

пн, 13 янв. 2020 г., 17:35 Qing Lv <lvqingjiejie at 163.com>:

> Dear All,
>
>
> I wonder if the error bars are necessary for umbrella sampling in PMF
> calculation? If yes, how should the error bars be calculated? Need I do 2~3
> repeats (with different random initial velocites assigned)?
>
>
> Thanks,
> Qing
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