[gmx-users] visualizing CONCOORD trayectory

[Bert de Groot]

Ruben Martinez-Buey wrote:
> Hi all,
> I have generated a CONCOORD trajectory in xtc format (with all atoms 
> included) and I want to see it . Since I have no a tpr file to use  as 
> input for ngmx I cannot see the trayectory. Furthermore, with  VMD  it 
> can be only visualized as one spot/atom, but I cannot see ribbons, 
> trace, wireframe, backbone or any other grahical representation. Do you 
> know how to solve this?

try pymol

Bert

________________________________________________
Bert de Groot, PhD

Max Planck Institute for Biophysical Chemistry
Computational biomolecular dynamics group
Am Fassberg 11
37077 Goettingen, Germany

tel: +49-551-2012308, fax: +49-551-2012302

email: bgroot at gwdg.de
http://www.mpibpc.mpg.de/groups/de_groot