[gmx-users] What molecule generator should be used if using GROMOS Force Field?
David van der Spoel
spoel at xray.bmc.uu.se
Sun May 20 21:00:21 CEST 2007
WU Yanbin wrote:
> Hi, Everyone,
> If I use GROMOS force field, what molecule generator, specially the
> topology generation, should I use (just like for gromacs force field,
> there is PRODRG)?
> I have tried to convert gromacs topology to GROMOS topology. The
> problem is that some atom type like "CS2" in PEO does noe exist in
> GROMOS force field. And GROMOS manual can not be downloaded for free.
> Where can I find description for each atom type in GROMOS? Any
> suggestions? Thanks in advance.
have you checked the gromos papers?
> Yours Sincerely,
> WU Yanbin
>
>
> ------------------------------------------------------------------------
>
> _______________________________________________
> gmx-users mailing list gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://folding.bmc.uu.se
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
More information about the gromacs.org_gmx-users
mailing list