[gmx-users] What molecule generator should be used if using GROMOS Force Field?

[Stéphane Téletchéa]

WU Yanbin a écrit :
> Hi, Everyone,
>   If I use GROMOS force field, what molecule generator, specially the 
> topology generation, should I use (just like for gromacs force field, 
> there is PRODRG)?
>   I have tried to convert gromacs topology to GROMOS topology. The 
> problem is that some atom type like "CS2" in PEO does noe exist in 
> GROMOS force field. And GROMOS manual can not be downloaded for free. 
> Where can I find description for each atom type in GROMOS? Any 
> suggestions? Thanks in advance.
>                                              Yours Sincerely,
>                                                           WU Yanbin
> 

The manual is downloadable for free:
http://www.gromacs.org/gromacs/documentation/documentation.html

You can even have a look at it online:
http://www.gromacs.org/external/online-reference-manual.html

Have a good lecture,
Stéphane

-- 
Stéphane Téletchéa, PhD.                  http://www.steletch.org
Unité Mathématique Informatique et Génome http://migale.jouy.inra.fr/mig
INRA, Domaine de Vilvert                  Tél : (33) 134 652 891
78352 Jouy-en-Josas cedex, France         Fax : (33) 134 652 901