[gmx-users] Temperature Coupling and Coupling-Groups

shayamra at post.tau.ac.il shayamra at post.tau.ac.il
Mon Mar 1 17:10:17 CET 2010

Greetings dear Gromacs users,

I would like to create a membrane-protein simulations (popc + protein,  
water, Na Cl ions, using Berendsen thermostat) and I am not sure which  
coupling-groups I should use.
For example, why not couple the whole system together?

I do realize that this is a large request on this type of mailing  
list. I will also be happy to receive references to relevant literature.

Thanks in advance,

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