[gmx-users] monomer to dimer

[Hossein Lanjanian]

Thanks
justin
On Sep 21, 2012 6:53 PM, "Justin Lemkul" <jalemkul at vt.edu> wrote:

>
>
> On 9/21/12 10:49 AM, Hossein Lanjanian wrote:
>
>> Dear all
>> I want to simulate insulin receptor in plasma membrane. The monomer form
>> of
>> receptor, that has 1382 amino acid, is available in Uniprot database. But
>> I
>> need dimer form of it.
>> question: How can I prepare a pdb file of dimer? Is there any better
>> suggestion instead of manipulating pdb file of monomer?
>>
>>
> If there is no available structure for the dimer, then you need to produce
> one based on any and all available experimental evidence for how two
> monomers may interact.
>
> -Justin
>
> --
> ==============================**==========
>
> Justin A. Lemkul, Ph.D.
> Research Scientist
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin>
>
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