[gmx-users] force field

elham tazikeh elham.tazikeh at gmail.com
Fri May 9 07:12:04 CEST 2014


 Dear Justin
thanks for your quick reply
i,mgoing to simulate zinc ion on Amyloid beta peptide at 300k...and i
choose 1ZE9 as pdb
my choice is correct or i have to pdb of protein without  cation for my
work or can i delete zinc ion  effect in that pdb?
for force field choosing ,i think Opls is appropriate for this
simulation...isn,t it?
best wishes
elham


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