May 2014 Archives by subject
Starting: Thu May 1 08:33:54 CEST 2014
Ending: Sat May 31 23:08:07 CEST 2014
Messages: 754
- [gmx-users] (no subject)
Balasubramanian Suriyanarayanan
- [gmx-users] (no subject)
Balasubramanian Suriyanarayanan
- [gmx-users] (no subject)
Meenakshi Rajput
- [gmx-users] (no subject)
HANNIBAL LECTER
- [gmx-users] (no subject)
lloyd riggs
- [gmx-users] (no subject)
Mahboobeh Eslami
- [gmx-users] (no subject)
elham tazikeh
- [gmx-users] (no subject)
Dhanachandra Singh
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] 2D PMF for two ions
Rebeca García Fandiño
- [gmx-users] A problem about g_dielectric
来者可追
- [gmx-users] abnormal MSD values
Riccardo Concu
- [gmx-users] about exchange replica with replicas 140
#ZHANG HAIPING#
- [gmx-users] about exchange replica with replicas 140
Justin Lemkul
- [gmx-users] AdResS - adress_reference_coords
Jakub Krajniak
- [gmx-users] AdResS - adress_reference_coords
Christoph Junghans
- [gmx-users] Alcohol molecules moving from water/vacuum interface
William Foskett
- [gmx-users] Alcohol molecules moving from water/vacuum interface
Mark Abraham
- [gmx-users] Alcohol molecules moving from water/vacuum interface
William Foskett
- [gmx-users] Alcohol molecules moving from water/vacuum interface
Dallas Warren
- [gmx-users] Alcohol molecules moving from water/vacuum interface
William Foskett
- [gmx-users] Alcohol molecules moving from water/vacuum interface
Justin Lemkul
- [gmx-users] Alcohol molecules moving from water/vacuum interface
William Foskett
- [gmx-users] Alcohol molecules moving from water/vacuum interface
Justin Lemkul
- [gmx-users] All-atom MD simulation of a protein at 323K and 283K
Pappu Kumar
- [gmx-users] All-atom MD simulation of a protein at 323K and 283K
Erik Marklund
- [gmx-users] All-atom MD simulation of a protein at 323K and 283K
Justin Lemkul
- [gmx-users] amber to gromacs conversion
Chetan Mahajan
- [gmx-users] amber to gromacs conversion of LJ potential
Chetan Mahajan
- [gmx-users] amber to gromacs conversion of LJ potential
Justin Lemkul
- [gmx-users] angle-angle and bond-angle cross terms
João T. S. Coimbra
- [gmx-users] angle-angle and bond-angle cross terms
Justin Lemkul
- [gmx-users] angle-restaint
Rasha Alqus
- [gmx-users] Applying restraint onto Sodium Atoms
Carlos Navarrro Retamal
- [gmx-users] Applying restraint onto Sodium Atoms
Justin Lemkul
- [gmx-users] aptamer
fatemeh ramezani
- [gmx-users] Atomic charges: RESP or AM1-BCC
Oliver Schillinger
- [gmx-users] Atomic charges: RESP or AM1-BCC
Alan
- [gmx-users] Backward (CG to atomistic), no charmm27
shivangi nangia
- [gmx-users] Backward (CG to atomistic), no charmm27
Justin Lemkul
- [gmx-users] Backward (CG to atomistic), no charmm27
Tsjerk Wassenaar
- [gmx-users] Backward (CG to atomistic), no charmm27
shivangi nangia
- [gmx-users] Backward (CG to atomistic), no charmm27
shivangi nangia
- [gmx-users] Backward (CG to atomistic), no charmm27
shivangi nangia
- [gmx-users] Backward (CG to atomistic), no charmm27
Tsjerk Wassenaar
- [gmx-users] BCAM Internship Position Announcement
Bruno Escribano
- [gmx-users] berendsen vs parrinello-rahman
Nilesh Dhumal
- [gmx-users] berendsen vs parrinello-rahman
Justin Lemkul
- [gmx-users] berendsen vs parrinello-rahman
Nilesh Dhumal
- [gmx-users] berendsen vs parrinello-rahman
Mark Abraham
- [gmx-users] berendsen vs parrinello-rahman
Nilesh Dhumal
- [gmx-users] berendsen vs parrinello-rahman
Michael Shirts
- [gmx-users] berendsen vs parrinello-rahman
Mark Abraham
- [gmx-users] Binding energy of membrane protein to the membrane lipids
Victor Sojo
- [gmx-users] Binding energy of membrane protein to the membrane lipids
Justin Lemkul
- [gmx-users] binding sites with MD
Nidhi Katyal
- [gmx-users] binding sites with MD
Justin Lemkul
- [gmx-users] binding sites with MD
Michael Shirts
- [gmx-users] binding sites with MD
Tom Dodson
- [gmx-users] binding sites with MD
Albert
- [gmx-users] binding sites with MD
Michael Shirts
- [gmx-users] binding sites with MD
Albert
- [gmx-users] binding sites with MD
lloyd riggs
- [gmx-users] binding sites with MD
Tom Dodson
- [gmx-users] calculating block average and error estimate by g_analyze tool in gromacs
mircial at sjtu.edu.cn
- [gmx-users] calculation of the desolvation energy of a charged molecule through free energy perturbation
Jin Zhang
- [gmx-users] can you Provide cardiolipin parameter file?
gejingming
- [gmx-users] Can't make links on GROMACS
Ooker
- [gmx-users] Can't make links on GROMACS
Justin Lemkul
- [gmx-users] Can't make links on GROMACS
Ooker
- [gmx-users] Can't make links on GROMACS
Justin Lemkul
- [gmx-users] Can't make links on GROMACS
Ooker
- [gmx-users] Can't make links on GROMACS
Justin Lemkul
- [gmx-users] Can't make links on GROMACS
Chandan Choudhury
- [gmx-users] Can't make links on GROMACS
Ly Minh Nhat
- [gmx-users] Can't make links on GROMACS
Justin Lemkul
- [gmx-users] Can't make links on GROMACS
Ooker
- [gmx-users] Can't make links on GROMACS
Mark Abraham
- [gmx-users] Can't make links on GROMACS
Ooker
- [gmx-users] Cannot Generate CHARMM36 Topology for POPC with Virtual Sites
Prajapati, Jigneshkumar Dahyabhai
- [gmx-users] Cannot Generate CHARMM36 Topology for POPC with Virtual Sites
Justin Lemkul
- [gmx-users] Capping groups
Justin Lemkul
- [gmx-users] cgenff_charmm2gmx.py failed
Albert
- [gmx-users] cgenff_charmm2gmx.py failed
Justin Lemkul
- [gmx-users] cgenff_charmm2gmx.py failed
Gurunath Katagi
- [gmx-users] cgenff_charmm2gmx.py failed
Albert
- [gmx-users] cgenff_charmm2gmx.py failed
Albert
- [gmx-users] Choosing lipid type
Justin Lemkul
- [gmx-users] Citing gromacs tools
rajat desikan
- [gmx-users] Citing gromacs tools
David van der Spoel
- [gmx-users] Citing gromacs tools
rajat desikan
- [gmx-users] CNT ROTATION
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] CNT ROTATION
Dr. Vitaly Chaban
- [gmx-users] CNT ROTATION
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] CNT ROTATION
Justin Lemkul
- [gmx-users] CNT ROTATION
Dr. Vitaly Chaban
- [gmx-users] CNT ROTATION
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] CNT ROTATION
Justin Lemkul
- [gmx-users] CNT ROTATION
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] CNT ROTATION
Justin Lemkul
- [gmx-users] CNT ROTATION
Dr. Vitaly Chaban
- [gmx-users] Combining .edr-files with eneconv
Gmx QA
- [gmx-users] Combining .edr-files with eneconv
Mark Abraham
- [gmx-users] Compatible GPU List
Hadi Mehrabian
- [gmx-users] Compatible GPU List
Szilárd Páll
- [gmx-users] Compiling gromacs 4.6.5 on cray XT5m
Gmx QA
- [gmx-users] Compiling gromacs 4.6.5 on cray XT5m
Gmx QA
- [gmx-users] Conferences in 2014
Ricardo O. S. Soares
- [gmx-users] Conferences in 2014
Mark Abraham
- [gmx-users] confirm please
Chetan Mahajan
- [gmx-users] confirm please
Chetan Mahajan
- [gmx-users] confirm please
Justin Lemkul
- [gmx-users] constraint error
Lovika Moudgil
- [gmx-users] constraint error
Justin Lemkul
- [gmx-users] constraint error
Lovika Moudgil
- [gmx-users] constraints
Nicola Staffolani
- [gmx-users] constraints
Justin Lemkul
- [gmx-users] constraints
Nicola Staffolani
- [gmx-users] constraints
Justin Lemkul
- [gmx-users] constraints
Nicola Staffolani
- [gmx-users] constraints
Justin Lemkul
- [gmx-users] convert Amber .frcmod file into Gromacs .itp file
Ahmet yıldırım
- [gmx-users] counter ions in coarse grained simulations
Neha Gandhi
- [gmx-users] counter ions in coarse grained simulations
Venkat Reddy
- [gmx-users] crystal slab and position restraints: com option
Chetan Mahajan
- [gmx-users] crystal slab and position restraints: com option
Justin Lemkul
- [gmx-users] crystal slab and position restraints: com option
Chetan Mahajan
- [gmx-users] crystal slab and position restraints: com option
Justin Lemkul
- [gmx-users] cutoff-scheme in CPU& GPU
Yorquant Wang
- [gmx-users] cutoff-scheme in CPU& GPU
Yorquant Wang
- [gmx-users] cutoff-scheme in CPU& GPU
Yorquant Wang
- [gmx-users] cutoff-scheme in CPU& GPU
Que Pasa
- [gmx-users] cutoff-scheme in CPU& GPU
Szilárd Páll
- [gmx-users] cutoff-scheme in CPU& GPU
Szilárd Páll
- [gmx-users] Degree of hydrogen bonding
Udaya Dahal
- [gmx-users] Degree of hydrogen bonding
Justin Lemkul
- [gmx-users] Degree of hydrogen bonding
Udaya Dahal
- [gmx-users] Degree of hydrogen bonding
Justin Lemkul
- [gmx-users] Degree of hydrogen bonding
Mark Abraham
- [gmx-users] Degree of hydrogen bonding
Udaya Dahal
- [gmx-users] Degree of hydrogen bonding
Udaya Dahal
- [gmx-users] dielectric constant of water by gromacs
David van der Spoel
- [gmx-users] dielectric constant of water by gromacs
Harshkumar Singh
- [gmx-users] dielectric constant of water by gromacs
David van der Spoel
- [gmx-users] dielectric constant of water by gromacs
Harshkumar Singh
- [gmx-users] Diferent Pressure Solvent
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] Diferent Pressure Solvent
Justin Lemkul
- [gmx-users] Diferent Pressure Solvent
Dr. Vitaly Chaban
- [gmx-users] Diferent Pressure Solvent
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] Diferent Pressure Solvent
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] Diferent Pressure Solvent
Dr. Vitaly Chaban
- [gmx-users] Does anyone use GROMACS for carbohydrates?
Tamir Dingjan
- [gmx-users] dssp installation error
elham tazikeh
- [gmx-users] dssp installation error
Erik Marklund
- [gmx-users] editconf - CoM?
Nicola Staffolani
- [gmx-users] editonf: Center of Mass?
Nicola Staffolani
- [gmx-users] editonf: Center of Mass?
Nicola Staffolani
- [gmx-users] editonf: Center of Mass?
Justin Lemkul
- [gmx-users] editonf: Center of Mass?
Nicola Staffolani
- [gmx-users] Embedded view of the users list
Andrew DeYoung
- [gmx-users] Embedded view of the users list
Justin Lemkul
- [gmx-users] Empirical force fields: release new version of RED Server Dev/PyRED
FyD
- [gmx-users] energy
mirko busato
- [gmx-users] energy
Justin Lemkul
- [gmx-users] energy
mirko busato
- [gmx-users] energy
Justin Lemkul
- [gmx-users] Entropy
tarak karmakar
- [gmx-users] entropy vs time plot
tarak karmakar
- [gmx-users] entropy vs time plot
Tsjerk Wassenaar
- [gmx-users] entropy vs time plot
tarak karmakar
- [gmx-users] entropy vs time plot
David van der Spoel
- [gmx-users] entropy vs time plot
tarak karmakar
- [gmx-users] entropy vs time plot
lloyd riggs
- [gmx-users] error in running systems in parallel
Balasubramani GL
- [gmx-users] error in running systems in parallel
Justin Lemkul
- [gmx-users] error message in mdrun: Check for bad contacts and/or reduce the timestep if appropriate.
Nizar Masbukhin
- [gmx-users] error message in mdrun: Check for bad contacts and/or reduce the timestep if appropriate.
Justin Lemkul
- [gmx-users] Error while trying to create a membrane-protein system
Justin Lemkul
- [gmx-users] Error while trying to create a membrane-protein system
Spyridon Vicatos
- [gmx-users] Error while trying to create a membrane-protein system
Justin Lemkul
- [gmx-users] Error while trying to create a membrane-protein system
Spyridon Vicatos
- [gmx-users] Error: dangling bond at atleast one of terminals
Balasubramanian Suriyanarayanan
- [gmx-users] Error: dangling bond at atleast one of terminals
Justin Lemkul
- [gmx-users] flat-bottomed potentials
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] force field
elham tazikeh
- [gmx-users] force field
Justin Lemkul
- [gmx-users] force field
elham tazikeh
- [gmx-users] force field
Justin Lemkul
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
David Ackerman
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
Ollila Samuli
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
Justin Lemkul
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
David Ackerman
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
Justin Lemkul
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
David Ackerman
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
Ollila Samuli
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
Piggot T.
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
David van der Spoel
- [gmx-users] Force Field for Bilayer Simulations with Cholesterol and Proteins
David Ackerman
- [gmx-users] Free Energy Landscape: Protein-Ligand System
Jacob Babinec
- [gmx-users] Free Energy Landscape: Protein-Ligand System
Justin Lemkul
- [gmx-users] from amber to opls
Rebeca García Fandiño
- [gmx-users] from amber to opls
Justin Lemkul
- [gmx-users] Fwd: g_kinetics
bharat gupta
- [gmx-users] Fwd: related to bug 1222
albert ardevol
- [gmx-users] Fwd: related to bug 1222
Mark Abraham
- [gmx-users] Fwd: related to bug 1222
Szilárd Páll
- [gmx-users] g_anaeig -extr option
gromacs query
- [gmx-users] g_cluster: treating identical molecules as interchangeable
Gil Rutter
- [gmx-users] g_cluster: treating identical molecules as interchangeable
Mark Abraham
- [gmx-users] g_cluster: treating identical molecules as interchangeable
Mark Abraham
- [gmx-users] g_cluster: treating identical molecules as interchangeable
Erik Marklund
- [gmx-users] g_covar
elham tazikeh
- [gmx-users] g_covar
Tsjerk Wassenaar
- [gmx-users] g_dielectric errors for getting frequency dependent dielectric constants
550931258 at qq.com
- [gmx-users] g_dielectric problem
Guilherme Duarte Ramos Matos
- [gmx-users] g_dipoles
Nilesh Dhumal
- [gmx-users] g_dipoles
David van der Spoel
- [gmx-users] g_dipoles
Nilesh Dhumal
- [gmx-users] g_dipoles
David van der Spoel
- [gmx-users] g_disre problem
B Harish
- [gmx-users] g_kinetics
bharat gupta
- [gmx-users] g_kinetics
Mark Abraham
- [gmx-users] g_kinetics
bharat gupta
- [gmx-users] g_mdmat truncation distance for contacts
rajat desikan
- [gmx-users] gen pairs missing from vmd top
gromacs query
- [gmx-users] gen pairs missing from vmd top
Justin Lemkul
- [gmx-users] gen-pairs, nrexcl and [ pairs ] in itp files
Hardy, Adam
- [gmx-users] gen-pairs, nrexcl and [ pairs ] in itp files
Bogdan Costescu
- [gmx-users] gen-pairs, nrexcl and [ pairs ] in itp files
Bogdan Costescu
- [gmx-users] gen-pairs, nrexcl and [ pairs ] in itp files
Jon Kapla
- [gmx-users] gen-pairs, nrexcl and [ pairs ] in itp files
Hardy, Adam
- [gmx-users] gen-pairs, nrexcl and [ pairs ] in itp files
Jon Kapla
- [gmx-users] Generating Glycerol parameters from propanol parameters - OPLS
Carlos Navarrro Retamal
- [gmx-users] Generating Glycerol parameters from propanol parameters - OPLS
Dr. Vitaly Chaban
- [gmx-users] Generating Glycerol parameters from propanol parameters - OPLS
Carlos Navarrro Retamal
- [gmx-users] Generating Glycerol parameters from propanol parameters - OPLS
Justin Lemkul
- [gmx-users] Generating Glycerol parameters from propanol parameters - OPLS
Andrey Frolov
- [gmx-users] genion
elham tazikeh
- [gmx-users] genion
Que Pasa
- [gmx-users] GPU for free energy calculation?
Albert
- [gmx-users] GPU for free energy calculation?
Szilárd Páll
- [gmx-users] GPU in Ubuntu
lloyd riggs
- [gmx-users] GPU in Ubuntu
Albert
- [gmx-users] GPU in Ubuntu
Szilárd Páll
- [gmx-users] GPU in Ubuntu
Szilárd Páll
- [gmx-users] GPU in Ubuntu
lloyd riggs
- [gmx-users] gpu k20x vs k40
Andrei Neamtu
- [gmx-users] gpu k20x vs k40
Mirco Wahab
- [gmx-users] gpu k20x vs k40
Andrei Neamtu
- [gmx-users] GPU not found
Albert
- [gmx-users] GPU not found
Mirco Wahab
- [gmx-users] GPU not found
Albert
- [gmx-users] GPU not found
Mirco Wahab
- [gmx-users] GPU not found
Albert
- [gmx-users] GPU not found
Mirco Wahab
- [gmx-users] Gromacs 5, TNG, and older trajectory formats
bernhard
- [gmx-users] Gromacs 5, TNG, and older trajectory formats
Magnus Lundborg
- [gmx-users] gromacs 5.0
Anders Gabrielsson
- [gmx-users] gromacs 5.0
Reid Van Lehn
- [gmx-users] Gromacs and Lammps: energy conservation very different
Michael Shirts
- [gmx-users] Gromacs and Lammps: energy conservation very different
Mark Abraham
- [gmx-users] Gromacs and Lammps: energy conservation very different
James
- [gmx-users] Gromacs and Lammps: energy conservation very different
James
- [gmx-users] Gromacs and Lammps: energy conservation very different
Michael Shirts
- [gmx-users] Gromacs and Lammps: energy conservation very different
James
- [gmx-users] Gromacs for reverse transformation
shivangi nangia
- [gmx-users] Gromacs for reverse transformation
Tsjerk Wassenaar
- [gmx-users] Gromacs for reverse transformation
Chandan Choudhury
- [gmx-users] Gromacs for reverse transformation
Tsjerk Wassenaar
- [gmx-users] Gromacs for reverse transformation
shivangi nangia
- [gmx-users] Gromacs for reverse transformation
shivangi nangia
- [gmx-users] Gromacs for reverse transformation
Tsjerk Wassenaar
- [gmx-users] Gromacs for reverse transformation
Chandan Choudhury
- [gmx-users] Gromacs for reverse transformation
shivangi nangia
- [gmx-users] Gromacs for reverse transformation
Tsjerk Wassenaar
- [gmx-users] Gromacs for reverse transformation
shivangi nangia
- [gmx-users] Gromacs for reverse transformation
Tsjerk Wassenaar
- [gmx-users] Gromacs for reverse transformation
shivangi nangia
- [gmx-users] gromacs.org_gmx-users Digest, Vol 121, Issue 12
marzieh dehghan
- [gmx-users] gromacs.org_gmx-users Digest, Vol 121, Issue 32
Andrés Ortega
- [gmx-users] gromacs.org_gmx-users Digest, Vol 121, Issue 82
munubas at yahoo.com
- [gmx-users] gromacs.org_gmx-users Digest, Vol 121, Issue 82
Caro Miguel
- [gmx-users] grompp
Urszula Uciechowska
- [gmx-users] grompp
Justin Lemkul
- [gmx-users] help please @User-specified potential functions
Chetan Mahajan
- [gmx-users] help please @User-specified potential functions
Mark Abraham
- [gmx-users] help please @User-specified potential functions
Chetan Mahajan
- [gmx-users] help please @User-specified potential functions
Chetan Mahajan
- [gmx-users] help please @User-specified potential functions
Josip Lovrić
- [gmx-users] help please @User-specified potential functions
Mark Abraham
- [gmx-users] help please @User-specified potential functions
Chetan Mahajan
- [gmx-users] help please @User-specified potential functions
Mark Abraham
- [gmx-users] help please @User-specified potential functions
Chetan Mahajan
- [gmx-users] help please @User-specified potential functions
Mark Abraham
- [gmx-users] help please @User-specified potential functions
Chetan Mahajan
- [gmx-users] High density after genbox
sujithkakkat .
- [gmx-users] High density after genbox
Mark Abraham
- [gmx-users] High density after genbox
sujithkakkat .
- [gmx-users] High density after genbox
Mark Abraham
- [gmx-users] How to create a new lipid molecule topology if I have .pdb file for a molecule?
Todor Antonijevic
- [gmx-users] How to create a new lipid molecule topology if I have .pdb file for a molecule?
Justin Lemkul
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Mark Abraham
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Mark Abraham
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Andrea Spitaleri
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Justin Lemkul
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Justin Lemkul
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Tsjerk Wassenaar
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Tsjerk Wassenaar
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Tsjerk Wassenaar
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Tsjerk Wassenaar
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Chandan Choudhury
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Tsjerk Wassenaar
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Dallas Warren
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Tsjerk Wassenaar
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Tsjerk Wassenaar
- [gmx-users] How to efficiently fix pbc trajectories problems for VMD using
Vito Genna
- [gmx-users] how to generate .top file
Lovika Moudgil
- [gmx-users] how to generate .top file
abhijit Kayal
- [gmx-users] how to generate .top file
Tsjerk Wassenaar
- [gmx-users] how to generate .top file
Lovika Moudgil
- [gmx-users] how to generate .top file
Tsjerk Wassenaar
- [gmx-users] how to generate .top file
Lovika Moudgil
- [gmx-users] how to select heavy atoms of Ligand
atsutoshi.okabe at takeda.com
- [gmx-users] how to select heavy atoms of Ligand
Giuseppina La Sala
- [gmx-users] how to superimpose two structures of protein-ligand complex
atsutoshi.okabe at takeda.com
- [gmx-users] how to superimpose two structures of protein-ligand complex
Lenin Kandasamy
- [gmx-users] how to superimpose two structures of protein-ligand complex
ms
- [gmx-users] Hydrogen bonds
bharat gupta
- [gmx-users] Hydrogen bonds
Erik Marklund
- [gmx-users] Hydrogen bonds
Justin Lemkul
- [gmx-users] I keep receiving messages that I have been unsubscribed from the mailing list.
Bruce D. Ray
- [gmx-users] I keep receiving messages that I have been unsubscribed from the mailing list.
Rossen Apostolov
- [gmx-users] Ion concentration of genion vs charmm-gui
Ali Khan
- [gmx-users] Ion concentration of genion vs charmm-gui
Mark Abraham
- [gmx-users] Ion concentration of genion vs charmm-gui
Antonio Baptista
- [gmx-users] Ion concentration of genion vs charmm-gui
Ali Khan
- [gmx-users] Ion concentration of genion vs charmm-gui
Erik Marklund
- [gmx-users] Ion concentration of genion vs charmm-gui
Ali Khan
- [gmx-users] Ion concentration of genion vs charmm-gui
Justin Lemkul
- [gmx-users] Ion concentration of genion vs charmm-gui
Ali Khan
- [gmx-users] Ion concentration of genion vs charmm-gui
Justin Lemkul
- [gmx-users] Is there ff12sb equivalent of gbsa_ff99sb.itp?
Richard Smith
- [gmx-users] Is there ff12sb equivalent of gbsa_ff99sb.itp?
Justin Lemkul
- [gmx-users] Langevin sd integrator: wrong average temperature
Andrey Frolov
- [gmx-users] Langevin sd integrator: wrong average temperature
Justin Lemkul
- [gmx-users] Langevin sd integrator: wrong average temperature
Andrey Frolov
- [gmx-users] Langevin sd integrator: wrong average temperature
Michael Shirts
- [gmx-users] Langevin sd integrator: wrong average temperature
Christopher Neale
- [gmx-users] Langevin sd integrator: wrong average temperature
Mark Abraham
- [gmx-users] Langevin sd integrator: wrong average temperature
Szilárd Páll
- [gmx-users] Langevin sd integrator: wrong average temperature
Szilárd Páll
- [gmx-users] large free energy difference of mutating ATP to GTP in solution using FEP method in Gromacs-4.6.5
dbaogen
- [gmx-users] large free energy difference of mutating ATP to GTP in solution using FEP method in Gromacs-4.6.5
Michael Shirts
- [gmx-users] large free energy difference of mutating ATP to GTP in solution using FEP method in Gromacs-4.6.5
Michael Shirts
- [gmx-users] large free energy difference of mutating ATP to GTP in solution using FEP method in Gromacs-4.6.5
Michael Shirts
- [gmx-users] LIE method
Mahboobeh Eslami
- [gmx-users] LIE method
Mahboobeh Eslami
- [gmx-users] LIE method
Justin Lemkul
- [gmx-users] LIE method
Mahboobeh Eslami
- [gmx-users] LIE method
Justin Lemkul
- [gmx-users] lifetime of hydrogen bond of bulk water too large
Calixte, Emvia I
- [gmx-users] lifetime of hydrogen bond of bulk water too large
Calixte, Emvia I
- [gmx-users] Ligand RMSD greater than Protein C alpha RMSD
MUSYOKA THOMMAS
- [gmx-users] Ligand RMSD greater than Protein C alpha RMSD
Justin Lemkul
- [gmx-users] Loop refirement using simulated annealing
James Starlight
- [gmx-users] Loop refirement using simulated annealing
Christopher Neale
- [gmx-users] Loop refirement using simulated annealing
James Starlight
- [gmx-users] MD simulation at pH 2
Turgay Cakmak
- [gmx-users] MD simulation at pH 2
Dr. Vitaly Chaban
- [gmx-users] MD simulation at pH 2
Justin Lemkul
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Yu Ogawa
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Mark Abraham
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Yu Ogawa
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Mark Abraham
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Yu Ogawa
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Justin Lemkul
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Yu Ogawa
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Justin Lemkul
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Yu Ogawa
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Thomas C. O'Connor
- [gmx-users] md-vv run with the Nose-Hoover thermostat crashed..
Mark Abraham
- [gmx-users] mdrun error
Lovika Moudgil
- [gmx-users] mdrun error
Mark Abraham
- [gmx-users] mdrun error
Lovika Moudgil
- [gmx-users] mdrun error
Mark Abraham
- [gmx-users] mdrun error
Lovika Moudgil
- [gmx-users] mdrun error
Lovika Moudgil
- [gmx-users] mdrun error
Justin Lemkul
- [gmx-users] mdrun error
Lovika Moudgil
- [gmx-users] mdrun failed
Albert
- [gmx-users] mdrun failed
Mark Abraham
- [gmx-users] mdrun failed
Albert
- [gmx-users] mdrun failed
Mark Abraham
- [gmx-users] mdrun_mpi with cmake
Soren Wacker
- [gmx-users] mdrun_mpi with cmake
Szilárd Páll
- [gmx-users] mdrun_mpi with cmake
Soren Wacker
- [gmx-users] mdrun_mpi with cmake
Justin Lemkul
- [gmx-users] mdrun_mpi with cmake with GMX_BUILD_MDRUN_ONLY=ON
Soren Wacker
- [gmx-users] mdrun_mpi with cmake with GMX_BUILD_MDRUN_ONLY=ON
Justin Lemkul
- [gmx-users] mdrun_mpi with cmake with GMX_BUILD_MDRUN_ONLY=ON
Soren Wacker
- [gmx-users] mdrun_mpi with cmake with GMX_BUILD_MDRUN_ONLY=ON
Soren Wacker
- [gmx-users] membrane protein simulation - ligand introduction
Balasubramanian Suriyanarayanan
- [gmx-users] membrane protein simulation - ligand introduction
Justin Lemkul
- [gmx-users] merge two .top file
Lovika Moudgil
- [gmx-users] merge two .top file
Justin Lemkul
- [gmx-users] merge two .top file
Lovika Moudgil
- [gmx-users] MM-GB/SA analysis in Gromacs
tarak karmakar
- [gmx-users] MMPBSA with GROMACS: a new revised tool
andrea
- [gmx-users] MMPBSA with GROMACS: a new revised tool
Zhi Yue
- [gmx-users] MMPBSA with GROMACS: a new revised tool
Andrea Spitaleri
- [gmx-users] Multi-node GPU runs crashing with a fork() warning
Thomas C. O'Connor
- [gmx-users] Multi-node GPU runs crashing with a fork() warning
Szilárd Páll
- [gmx-users] Multi-node GPU runs crashing with a fork() warning
Thomas C. O'Connor
- [gmx-users] Multi-node GPU runs crashing with a fork() warning
Mark Abraham
- [gmx-users] Multi-node GPU runs crashing with a fork() warning
Szilárd Páll
- [gmx-users] multiple molecules of same type and .top file
Chetan Mahajan
- [gmx-users] multiple molecules of same type and .top file
Justin Lemkul
- [gmx-users] Nanoparticle topology
guhansingh
- [gmx-users] Nanoparticle topology
HANNIBAL LECTER
- [gmx-users] need guidance
Lovika Moudgil
- [gmx-users] Need guidance
Lovika Moudgil
- [gmx-users] New Molecule Topology
Todor Antonijevic
- [gmx-users] New Molecule Topology
Justin Lemkul
- [gmx-users] New Molecule Topology
Todor Antonijevic
- [gmx-users] New Molecule Topology
Justin Lemkul
- [gmx-users] New Molecule Topology
lloyd riggs
- [gmx-users] Non-bonded interaction
라지브간디
- [gmx-users] Non-bonded interaction
Mark Abraham
- [gmx-users] Non-bonded interaction
Justin Lemkul
- [gmx-users] Non-bonded interaction.
라지브간디
- [gmx-users] Non-bonded interaction.
Justin Lemkul
- [gmx-users] npt dynamics generate a lot of pdb files
Natalia Alveal F.
- [gmx-users] npt dynamics generate a lot of pdb files
Justin Lemkul
- [gmx-users] npt dynamics generate a lot of pdb files
Riccardo Concu
- [gmx-users] npt dynamics generate a lot of pdb files
Justin Lemkul
- [gmx-users] npt dynamics generate a lot of pdb files
Natalia Alveal F.
- [gmx-users] npt dynamics generate a lot of pdb files
Mark Abraham
- [gmx-users] npt dynamics generate a lot of pdb files
Natalia Alveal F.
- [gmx-users] Odd protein behavior in MD
Steve Seibold
- [gmx-users] Odd protein behavior in MD
Mark Abraham
- [gmx-users] Odd protein behavior in MD
Mark Abraham
- [gmx-users] parameters for torsion potental
Victor Rosas Garcia
- [gmx-users] PBC problems??
Steve Seibold
- [gmx-users] PBC problems??
Justin Lemkul
- [gmx-users] PBC correction to visualize a protein-membrane structure
Justin Lemkul
- [gmx-users] PBC correction to visualize a protein-membrane structure
Juan Munoz-Garcia
- [gmx-users] PBC correction to visualize a protein-membrane structure
Justin Lemkul
- [gmx-users] PBC correction to visualize a protein-membrane structure
Juan Munoz-Garcia
- [gmx-users] PBC correction to visualize a protein-membrane structure
Mark Abraham
- [gmx-users] PBC correction to visualize a protein-membrane structure
Juan Munoz-Garcia
- [gmx-users] PBC correction to visualize a protein-membrane structure
Justin Lemkul
- [gmx-users] PBC correction to visualize a protein-membrane structure
Juan Munoz-Garcia
- [gmx-users] PBC correction to visualize a protein-membrane structure
Juan Munoz-Garcia
- [gmx-users] PBC correction to visualize a protein-membrane structure
Juan Munoz-Garcia
- [gmx-users] pbc problem
elham tazikeh
- [gmx-users] pbc problem
Justin Lemkul
- [gmx-users] poor minimization?
Chetan Mahajan
- [gmx-users] Positive energy .
sujithkakkat .
- [gmx-users] Positive energy .
Bryan Roessler
- [gmx-users] Positive energy .
Rasoul Nasiri
- [gmx-users] Positive energy .
Justin Lemkul
- [gmx-users] Positive energy .
sujithkakkat .
- [gmx-users] Positive energy .
Justin Lemkul
- [gmx-users] Positive energy .
sujithkakkat .
- [gmx-users] Positive energy .
Mark Abraham
- [gmx-users] possible configuration for gromacs gpu node
Harry Mark Greenblatt
- [gmx-users] possible configuration for gromacs gpu node
Szilárd Páll
- [gmx-users] possible configuration for gromacs gpu node
Harry Mark Greenblatt
- [gmx-users] possible configuration for gromacs gpu node
Szilárd Páll
- [gmx-users] possible configuration for gromacs gpu node
Harry Mark Greenblatt
- [gmx-users] possible configuration for gromacs gpu node
Szilárd Páll
- [gmx-users] Postdoctoral Fellowship in Energy Storage
Bruno Escribano
- [gmx-users] problem in using more than one molecule of a ligand in simulation
Hamid Irannejad
- [gmx-users] problem in using more than one molecule of a ligand in simulation
Justin Lemkul
- [gmx-users] Problem inserting protein into a POPC bilayer
Juan Munoz-Garcia
- [gmx-users] Problem inserting protein into a POPC bilayer
Juan Munoz-Garcia
- [gmx-users] problem of sodium topology
Albert
- [gmx-users] problem of sodium topology
Justin Lemkul
- [gmx-users] problem of sodium topology
Albert
- [gmx-users] problem still there for ACE
Albert
- [gmx-users] problem still there for ACE
Justin Lemkul
- [gmx-users] problem still there for ACE
Albert
- [gmx-users] problem still there for ACE
Justin Lemkul
- [gmx-users] problem still there for ACE
Albert
- [gmx-users] Problem with g_hbond perl script output
Jacob Babinec
- [gmx-users] Problem with g_hbond perl script output
Justin Lemkul
- [gmx-users] problem with NVT equilibration for membrane protein
Floriane Montanari
- [gmx-users] problem with NVT equilibration for membrane protein
Justin Lemkul
- [gmx-users] problem with pdb2gmx
Nizar Masbukhin
- [gmx-users] problem with pdb2gmx
Nizar Masbukhin
- [gmx-users] problem with pdb2gmx
Chandan Choudhury
- [gmx-users] problem with pdb2gmx
Justin Lemkul
- [gmx-users] problem with pdb2gmx
Nizar Masbukhin
- [gmx-users] problem with pdb2gmx
Nizar Masbukhin
- [gmx-users] Problems with trajectories
Steve Seibold
- [gmx-users] Problems with trajectories
Justin Lemkul
- [gmx-users] Problems with trajectories
rajat desikan
- [gmx-users] Problems with trajectories
Paulo Netz
- [gmx-users] PRODRG
Negar Parvizi
- [gmx-users] PRODRG
Soren Wacker
- [gmx-users] PRODRG
Justin Lemkul
- [gmx-users] producing several trajectories to check for reproducibility
Saman Shahriyari
- [gmx-users] producing several trajectories to check for reproducibility
Justin Lemkul
- [gmx-users] Protein preparation in Membrane simulation
Balasubramanian Suriyanarayanan
- [gmx-users] Protein preparation in Membrane simulation
Justin Lemkul
- [gmx-users] protein simulation
elham tazikeh
- [gmx-users] Protein-protein interaction energy
tarak karmakar
- [gmx-users] Protein-protein interaction energy
Justin Lemkul
- [gmx-users] query regarding automated topology builder and repository
Sanchaita Rajkhowa
- [gmx-users] query regarding automated topology builder and repository
Justin Lemkul
- [gmx-users] Query regarding dssp plot
Aditya Padhi
- [gmx-users] Query regarding dssp plot
Justin Lemkul
- [gmx-users] Query regarding dssp plot
Aditya Padhi
- [gmx-users] Query regarding dssp plot
Justin Lemkul
- [gmx-users] Query regarding dssp plot
Aditya Padhi
- [gmx-users] quesion about MIC
纪律部长 王海强
- [gmx-users] quesion about MIC
纪律部长 王海强
- [gmx-users] quesion about MIC
纪律部长 王海强
- [gmx-users] quesion about MIC
Christopher Neale
- [gmx-users] question
Andrew Bostick
- [gmx-users] question
Justin Lemkul
- [gmx-users] question
Atila Petrosian
- [gmx-users] question
Mark Abraham
- [gmx-users] question
Atila Petrosian
- [gmx-users] question
Erik Marklund
- [gmx-users] question
Mark Abraham
- [gmx-users] question about g_select
mojdeh akhavan
- [gmx-users] question about g_select
Mark Abraham
- [gmx-users] Question regarding gromacs error of g_membed
Spyros Vicatos
- [gmx-users] Questions about position restraint for charged proteins
Mark Abraham
- [gmx-users] Questions about position restraint for charged proteins
Koki Yokoi
- [gmx-users] Questions about position restraint for charged proteins
Mark Abraham
- [gmx-users] Questions about position restraint for charged proteins
massimo sandal
- [gmx-users] Questions about position restraint for charged proteins
Koki Yokoi
- [gmx-users] Questions about position restraint for charged proteins
Koki Yokoi
- [gmx-users] Questions about position restraint for charged proteins
Justin Lemkul
- [gmx-users] Questions about position restraint for charged proteins
Koki Yokoi
- [gmx-users] RDF of solvation shell molecules
sujithkakkat .
- [gmx-users] RDF of solvation shell molecules
Chandan Choudhury
- [gmx-users] RDF of solvation shell molecules
sujithkakkat .
- [gmx-users] RDF of solvation shell molecules
Justin Lemkul
- [gmx-users] Reaction-Field for coulombtype
Mahboobeh Eslami
- [gmx-users] refcoord-scaling
Chetan Mahajan
- [gmx-users] refcoord-scaling
Chetan Mahajan
- [gmx-users] refcoord-scaling
Chetan Mahajan
- [gmx-users] Reference value for berger POPC area per headgroup
Gmx QA
- [gmx-users] Reference value for berger POPC area per headgroup
Piggot T.
- [gmx-users] Reg Free enerfy calculation
vidhya sankar
- [gmx-users] Reg Free enerfy calculation
Justin Lemkul
- [gmx-users] Regarding calculating energy autocorrelation function
Mark Abraham
- [gmx-users] Regarding calculating energy autocorrelation function
ravikumarvenkatraman
- [gmx-users] Regarding calculation of energy auto-correlation function
Ravi Kumar Venkatraman
- [gmx-users] Regarding number of bonds to nanometer in g_polystat
Singam Karthick
- [gmx-users] Regarding number of bonds to nanometer in g_polystat
massimo sandal
- [gmx-users] Regarding the comparison of two result
rama david
- [gmx-users] Regarding the comparison of two result
Justin Lemkul
- [gmx-users] Regarding the comparison of two result
rajat desikan
- [gmx-users] Regarding the comparison of two result
rajat desikan
- [gmx-users] Regarding the comparison of two result
rama david
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Steven Neumann
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Justin Lemkul
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Steven Neumann
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Steven Neumann
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Mark Abraham
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Steven Neumann
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Mark Abraham
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Steven Neumann
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Mark Abraham
- [gmx-users] REMD - step 12005: Water molecule starting at atom 7030 can not be settled
Steven Neumann
- [gmx-users] REMD, demux after 100 ns per replica
Christopher Neale
- [gmx-users] REMD, demux after 100 ns per replica
Christopher Neale
- [gmx-users] REMD, demux after 100 ns per replica
Andrea Pérez-Villa
- [gmx-users] rhombic dodecahedron construction
Trayder Thomas
- [gmx-users] rhombic dodecahedron construction
Tsjerk Wassenaar
- [gmx-users] rhombic dodecahedron construction
Trayder Thomas
- [gmx-users] RMSD
elham tazikeh
- [gmx-users] RMSD
Justin Lemkul
- [gmx-users] Schlitter Configurational entropy 'NaN'
tarak karmakar
- [gmx-users] Schlitter Configurational entropy 'NaN'
David van der Spoel
- [gmx-users] Schlitter Configurational entropy 'NaN'
tarak karmakar
- [gmx-users] Schlitter Configurational entropy 'NaN'
David van der Spoel
- [gmx-users] Schlitter Configurational entropy 'NaN'
tarak karmakar
- [gmx-users] Schlitter Configurational entropy 'NaN'
David van der Spoel
- [gmx-users] Schlitter Configurational entropy 'NaN'
tarak karmakar
- [gmx-users] Schlitter Configurational entropy 'NaN'
tarak karmakar
- [gmx-users] Schlitter Configurational entropy 'NaN'
David van der Spoel
- [gmx-users] Schlitter Configurational entropy 'NaN'
tarak karmakar
- [gmx-users] Schlitter Configurational entropy 'NaN'
Justin Lemkul
- [gmx-users] Schlitter Configurational entropy 'NaN'
tarak karmakar
- [gmx-users] Schlitter Configurational entropy 'NaN'
David van der Spoel
- [gmx-users] Schlitter Configurational entropy 'NaN'
David van der Spoel
- [gmx-users] Schlitter Configurational entropy 'NaN'
tarak karmakar
- [gmx-users] Schlitter Configurational entropy 'NaN'
David van der Spoel
- [gmx-users] Secondary structure not visible after converting from .gro to .pdb
bharat gupta
- [gmx-users] Secondary structure not visible after converting from .gro to .pdb
Christopher Neale
- [gmx-users] Secondary structure not visible after converting from .gro to .pdb
Justin Lemkul
- [gmx-users] Secondary structure not visible after convertingfrom .gro to .pdb
bharat gupta
- [gmx-users] Secondary structure not visible after convertingfrom .gro to .pdb
Justin Lemkul
- [gmx-users] Secondary structure not visible after convertingfrom .gro to .pdb
Christopher Neale
- [gmx-users] Secondary structure not visible after convertingfrom .gro to .pdb
bharat gupta
- [gmx-users] Secondary structure not visible after convertingfrom .gro to .pdb
bharat gupta
- [gmx-users] Secondary structure not visible after convertingfrom .gro to .pdb
bharat gupta
- [gmx-users] Secondary structure not visible after convertingfrom .gro to .pdb
Justin Lemkul
- [gmx-users] Secondary structure not visible afterconverting from .gro to .pdb
Erik Marklund
- [gmx-users] Secondary structure not visible afterconverting from .gro to .pdb
bharat gupta
- [gmx-users] Secondary structure not visible afterconverting from .gro to .pdb
Mark Abraham
- [gmx-users] Secondary structure not visible afterconverting from .gro to .pdb
bharat gupta
- [gmx-users] Secondary structure not visible afterconverting from .gro to .pdb
Mark Abraham
- [gmx-users] Secondary structure not visible afterconverting from .gro to .pdb
Tsjerk Wassenaar
- [gmx-users] Secondary structure not visible afterconvertingfrom .gro to .pdb
bharat gupta
- [gmx-users] Secondary structure not visible afterconvertingfrom .gro to .pdb
Ali Khan
- [gmx-users] Secondary structure not visible afterconvertingfrom .gro to .pdb
bharat gupta
- [gmx-users] shifting to older version of gromacs after NVT-NPT and before MD run
Saman Shahriyari
- [gmx-users] shifting to older version of gromacs after NVT-NPT and before MD run
Justin Lemkul
- [gmx-users] Simulating protein peptide complex
Ruben Cloete
- [gmx-users] Simulating protein peptide complex
Justin Lemkul
- [gmx-users] Simulations in NVE ensemble with CHARMM36
ABEL Stephane 175950
- [gmx-users] Simulations in NVE ensemble with CHARMM36
Justin Lemkul
- [gmx-users] Simulations in NVE ensemble with CHARMM36 - update
ABEL Stephane 175950
- [gmx-users] Simulations in NVE ensemble with CHARMM36 - update
Justin Lemkul
- [gmx-users] small questions on tabulated functions
Chetan Mahajan
- [gmx-users] small questions on tabulated functions
Chetan Mahajan
- [gmx-users] SPC Water Bond Lengths
David Ackerman
- [gmx-users] SPC Water Bond Lengths
Justin Lemkul
- [gmx-users] SPC Water Bond Lengths
David Ackerman
- [gmx-users] SPC Water Bond Lengths
Justin Lemkul
- [gmx-users] SPC Water Bond Lengths
David Ackerman
- [gmx-users] tabulated potentials - cutoff
Sabine Reisser
- [gmx-users] tabulated potentials - cutoff
Mark Abraham
- [gmx-users] tabulated potentials - cutoff
Sabine Reisser
- [gmx-users] tabulated potentials - cutoff
Mark Abraham
- [gmx-users] tabulated potentials - cutoff
Mark Abraham
- [gmx-users] tabulated potentials - cutoff
Sabine Reisser
- [gmx-users] Temperature of protein-ligand systems
Jacob Babinec
- [gmx-users] Temperature of protein-ligand systems
David van der Spoel
- [gmx-users] Temperature of protein-ligand systems
Jin Zhang
- [gmx-users] Temperature of protein-ligand systems
Justin Lemkul
- [gmx-users] Testing GROMACS: Solvation free energy tests using CGENFF
Fahimeh Baftizadeh
- [gmx-users] Testing GROMACS: Solvation free energy tests using CGENFF
Fahimeh Baftizadeh
- [gmx-users] Testing gromacs: Thermodynamic integration using tabulated potential
Fahimeh Baftizadeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh Baftizadeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Mark Abraham
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Mark Abraham
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh Baftizadeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh Baftizadeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh Baftizadeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh Baftizadeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Mark Abraham
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Mark Abraham
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Fahimeh Baftizadeh
- [gmx-users] Testing gromacs: Thermodynamics integration using tabulated potential
Justin Lemkul
- [gmx-users] TIP5P water and Test Particle Insertion
Joerg Sauter
- [gmx-users] TIP5P water and Test Particle Insertion
Joerg Sauter
- [gmx-users] topol_pope.top
Balasubramanian Suriyanarayanan
- [gmx-users] topolbuild
Hossein Lanjanian
- [gmx-users] topolbuild
Bruce D. Ray
- [gmx-users] topolbuild error
marzieh dehghan
- [gmx-users] topolbuild error
Justin Lemkul
- [gmx-users] topolbuild error
Bruce D. Ray
- [gmx-users] topolbuild error (marzieh dehghan)
Justin Lemkul
- [gmx-users] topology in local?
Nicola Staffolani
- [gmx-users] topology in local?
Chandan Choudhury
- [gmx-users] topology in local?
Justin Lemkul
- [gmx-users] topology in local?
Nicola Staffolani
- [gmx-users] topology in local?
Nicola Staffolani
- [gmx-users] topology in local?
Chandan Choudhury
- [gmx-users] topology in local?
Nicola Staffolani
- [gmx-users] topology in local?
Justin Lemkul
- [gmx-users] topology in local?
Nicola Staffolani
- [gmx-users] topology in local?
Justin Lemkul
- [gmx-users] topology in local?
Nicola Staffolani
- [gmx-users] topology in local?
Justin Lemkul
- [gmx-users] topology in local?
Mark Abraham
- [gmx-users] topology in local?
Nicola Staffolani
- [gmx-users] translational dipole moment during the simulation
Nilesh Dhumal
- [gmx-users] translational dipole moment during the simulation
Christopher Neale
- [gmx-users] trjcat finds different spacing among trajectories
Giuseppina La Sala
- [gmx-users] trjcat finds different spacing among trajectories
Mark Abraham
- [gmx-users] trjcat finds different spacing among trajectories
Christopher Neale
- [gmx-users] trjcat finds different spacing among trajectories
Giuseppina La Sala
- [gmx-users] trjcat finds different spacing among trajectories
Mark Abraham
- [gmx-users] trjconv problems
Steve Seibold
- [gmx-users] Truncated .trr file size - 20% smaller than expected
Douglas Grahame
- [gmx-users] Truncated .trr file size - 20% smaller than expected
Justin Lemkul
- [gmx-users] Units of Gibbs free energy from g_sham
Venkat Reddy
- [gmx-users] Units of Gibbs free energy from g_sham
Justin Lemkul
- [gmx-users] Units of Gibbs free energy from g_sham
Venkat Reddy
- [gmx-users] Using Non-bonded interaction
라지브간디
- [gmx-users] Using Non-bonded interaction
Justin Lemkul
- [gmx-users] Using Non-bonded interaction
라지브간디
- [gmx-users] Using Non-bonded interaction
Justin Lemkul
- [gmx-users] vdw radii in g_sas
rajat desikan
- [gmx-users] vdw radii in g_sas
Justin Lemkul
- [gmx-users] vdw radii in g_sas
rajat desikan
- [gmx-users] vdw radii in g_sas
Justin Lemkul
- [gmx-users] vdw radii in g_sas
Tsjerk Wassenaar
- [gmx-users] vdw radii in g_sas
Antonio Baptista
- [gmx-users] vdw radii in g_sas
rajat desikan
- [gmx-users] vdw radii in g_sas
rajat desikan
- [gmx-users] Water model properties
Harshkumar Singh
- [gmx-users] Water model properties
Justin Lemkul
- [gmx-users] Water model properties
Harshkumar Singh
- [gmx-users] Water model properties
Harshkumar Singh
- [gmx-users] water stretched apart
Chetan Mahajan
- [gmx-users] water stretched apart
Tsjerk Wassenaar
- [gmx-users] water stretched apart
Chetan Mahajan
- [gmx-users] water stretched apart
Chandan Choudhury
- [gmx-users] water stretched apart
Chetan Mahajan
- [gmx-users] Which is better to make pqr files: pdb2pqr or GROMACS?
Ooker
- [gmx-users] Why does the list keep unsubscribing me?
X Rules
- [gmx-users] Why does the list keep unsubscribing me?
Rossen Apostolov
- [gmx-users] Why does the list keep unsubscribing me?
X Rules
- [gmx-users] Why in g_mindist the default 'distace for contacts' -d is .6
Lalit
- [gmx-users] Why in g_mindist the default 'distace for contacts' -d is .6
Mark Abraham
- [gmx-users] why two GTX780ti is slower?
Albert
- [gmx-users] why two GTX780ti is slower?
Mark Abraham
- [gmx-users] why two GTX780ti is slower?
Albert
- [gmx-users] why two GTX780ti is slower?
Szilárd Páll
- [gmx-users] why two GTX780ti is slower?
Albert
- [gmx-users] why two GTX780ti is slower?
Szilárd Páll
- [gmx-users] 回复: g_dielectric errors for getting frequency dependent dielectric constants
来者可追
- [gmx-users] 回复: 回复: 回复: can you Provide cardiolipin parameter file?
gejingming
- [gmx-users] 回复: 回复: can you Provide cardiolipin parameter file?
gejingming
- [gmx-users] 回复: 回复: can you Provide cardiolipin parameter file?
Piggot T.
- [gmx-users] 回复: can you Provide cardiolipin parameter file?
gejingming
- [gmx-users] 回复: can you Provide cardiolipin parameter file?
massimo sandal
- [gmx-users] 回复: can you Provide cardiolipin parameter file?
gejingming
- [gmx-users] 回复: can you Provide cardiolipin parameter file?
Tsjerk Wassenaar
- [gmx-users] 答复: about exchange replica with replicas 140
#ZHANG HAIPING#
- [gmx-users] 答复: 答复: about exchange replica with replicas 140
#ZHANG HAIPING#
- [gmx-users] 答复: 答复: Welcome to the "gromacs.org_gmx-users" mailing list
#ZHANG HAIPING#
- [gmx-users] 答复: about exchange replica with replicas 140
HANNIBAL LECTER
- [gmx-users] 答复: Welcome to the "gromacs.org_gmx-users" mailing list
#ZHANG HAIPING#
- [gmx-users] 答复: Welcome to the "gromacs.org_gmx-users" mailing list
Mark Abraham
Last message date:
Sat May 31 23:08:07 CEST 2014
Archived on: Sat May 31 23:08:08 CEST 2014
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