[gmx-users] membrane protein simulation - ligand introduction

Justin Lemkul jalemkul at vt.edu
Sat May 10 19:33:23 CEST 2014



On 5/10/14, 4:23 AM, Balasubramanian Suriyanarayanan wrote:
> Dear Users
>
> If membrane protein ligand complex needs to simulated in lipid bilayers
> then how to introduce ligand and at what step?
>

It's exactly like 
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/complex/index.html, 
then use the complex to build the membrane system.

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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