[gmx-users] how to generate .top file

abhijit Kayal abhijitchemiitd at gmail.com
Fri May 23 12:05:24 CEST 2014

for gold nano particle you can generate .top file using g_x2top, you have
to make necessary changes in ffnonbonded.itp and atomname. n2t files.

On Fri, May 23, 2014 at 3:09 PM, Lovika Moudgil <lovikamoudgil at gmail.com>wrote:

> Hi everyone..
> I have a .pdb file with protein and gold slab .Problem is I can generate
> .top file for  my protein with pdb2gmx but I want my slab in the same
> system .I can generate .gro file for both but what about .top file . Can
> any body help me with this issue .Thanks in advance.
> Regards
> Lovika
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Abhijit kayal
Research Scholar
Theoretical Chemistry
IIT Kanpur

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