[gmx-users] selection of pulling region

jinxin 18819028611 at 163.com
Wed Nov 12 16:17:11 CET 2014

hello! everyone, i want to perform the smd of my protein-protein interactions systmes. however, i don't know how to select the region of pulling. should i select the COM (center of mass) of one protein, only a atom,COM of some residues or the COM of a domian of the protien? What kind of effect on the results with diffrent selection of pulling region?
    thank you very much!

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