[gmx-users] free energy of methan
elham tazikeh
elham.tazikeh at gmail.com
Thu Oct 16 11:38:45 CEST 2014
Dear users
in attached *.mdp* file, if i replaced *init_lambda_state=0.05 , 0.1 , 0.15*
, ... instead of *0* for* lambda=0 *
is correct?
i didnot see foreign lambda in this mdp file.where i include foreign
lambda???
regards
elham tazikeh
*mdp file for lambda=0*
; Free energy control stuff
free_energy = yes
*init_lambda_state = 0*
*delta_lambda = 0*
calc_lambda_neighbors = 1 ; only immediate neighboring windows
; Vectors of lambda specified here
; Each combination is an index that is retrieved from init_lambda_state for
each simulation
; init_lambda_state 0 1 2 3 4 5 6 7 8
9 10 11 12 13 14 15 16 17 18 19 20
vdw_lambdas = 0.00 0.05 0.10 0.15 0.20 0.25 0.30 0.35 0.40
0.45 0.50 0.55 0.60 0.65 0.70 0.75 0.80 0.85 0.90 0.95 1.00
More information about the gromacs.org_gmx-users
mailing list