[gmx-users] Regarding the Pi-Pi and pi-cation interaction

rama david ramadavidgroup at gmail.com
Thu Oct 30 05:55:44 CET 2014

Dear Friends,

 I search the archive to find the answer of my question but I did not get
satisfied answer so I am putting the question in forum.

One of them is as

I want to study the MD simulation of Ligand and Receptor that is stabilize
 Pi-Pi and pi-cation interaction

1.  Is it right to say the  Pi-Pi and pi-cation interaction can be studied
by Molecular    dynamics??

2.  Which force field I have to use ??

3. In the analysis tools I found that no direct tools can do this directly.
    How to do this analysis

I am looking forward for reply.

With best regards,

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