[gmx-users] Martini force field - coarse grained protein tutorials
tsjerkw at gmail.com
Sun Sep 14 21:23:17 CEST 2014
Have you tried clicking on the .mdp file names in the commands, which are
underlined and highlighted in blue? Seems to work for me.
On Sep 14, 2014 12:41 PM, "Sridhar Kumar Kannam" <srisriphy at gmail.com>
> Hi All,
> I am a newbie to Gromacs and Martini force field. I begin with the
> tutorials - http://md.chem.rug.nl/cgmartini/index.php/proteins
> As this tutorial does not provide the .mdp files I have tried to built the
> .mdp files based on other Gromacs tutorials. But when I run the simulations
> I am getting different kinds of error. As I have not read the manual yet,
> its hard to debug the errors. Can someone please share the *mdp files to
> run this tutorial (Ubiquitin and HIV-Prtease) simulations.
> Thank you.
> Cheers !!!
> Sridhar Kumar Kannam :)
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