[gmx-users] trajectory file (xtc) visualization by VMD

Homa rooz ha.roozbahany at gmail.com
Thu Sep 10 18:25:29 CEST 2015


Hi guys!
I have  had a problem with VMD when reads frames on xtc file. It stops
suddenly. It seemed VMD is working out of memory so I remove solvent
molecules by trjconv command. It went further but still stops before the
end. What should I do? Can I remove some frame from the beginning part?
H​ow?​

-- 
Homa Ahmadi
Shahed University
Faculty of Basic Sciences
Alternative email> h.ahmadi at shahed.ac.ir <h.ahmadi at ast.ui.ac.ir>


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