[gmx-users] trajectory file (xtc) visualization by VMD

Francesco Carbone fra.carbone8 at gmail.com
Thu Sep 10 18:44:03 CEST 2015

When you open the file you can set "first frame", "last frame"and "stride".
Try to increase the stride to skip frames.

On 10 September 2015 at 17:25, Homa rooz <ha.roozbahany at gmail.com> wrote:

> Hi guys!
> I have  had a problem with VMD when reads frames on xtc file. It stops
> suddenly. It seemed VMD is working out of memory so I remove solvent
> molecules by trjconv command. It went further but still stops before the
> end. What should I do? Can I remove some frame from the beginning part?
> H​ow?​
> --
> Homa Ahmadi
> Shahed University
> Faculty of Basic Sciences
> Alternative email> h.ahmadi at shahed.ac.ir <h.ahmadi at ast.ui.ac.ir>
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