[gmx-users] Partial density versus time

Tsjerk Wassenaar tsjerkw at gmail.com
Wed Apr 6 16:58:52 CEST 2016


Hi Faezeh,

Using -b/-e flags you can get the density profile over a window of time (or
a single frame). Afterwards you can combine the results to have a density
profile over time.

Hope it helps,

Tsjerk

On Wed, Apr 6, 2016 at 4:29 PM, Faezeh Pousaneh <fpoosaneh at gmail.com> wrote:

> Hi,
>
> Is it possible to obtain partial density versus time in Gromacs? Precisely,
> I have a system of two components which separate by time. I need the
> evolution of density of each phase by time?
>
> thanks.
> Best regards
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-- 
Tsjerk A. Wassenaar, Ph.D.


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