[gmx-users] empty index group

David Newman david.newman-4 at postgrad.manchester.ac.uk
Thu Apr 21 13:29:58 CEST 2016


Hi,

So on Gromacs 4.6.5, I'm using the make_ndx command to try to create a custom index of a binding pocket on my protein of interest, I want to group 5 non-contiguous residues, I can index them separately and tried to group them with & but that creates an empty group error because I guess it is for linking separate options together not separate instances of the same option. Is there a way to achieve what I'm after?

Thanks,

David


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