[gmx-users] gromacs 5.1.2 mdrun can't detect GPU
Téletchéa Stéphane
stephane.teletchea at univ-nantes.fr
Fri Apr 22 18:40:27 CEST 2016
Le 22/04/2016 14:33, Szilárd Páll a écrit :
> Additionally, I suggest amending the post to note that the GDK and NVML
> that's picked up from it is optional and it is only useful with
> Quadro/Tesla cards.
Dear Szilárd,
I hope I'll find time to produce a proper bug report, but using the
Ubuntu binaries
with the ubuntu cuda runtime (so exact same version) 352.xx (same for
cuda and nvidia driver),
gromacs failed to detect the GPU. Up-to-now I have not traced down where
the problems lies.
This was I think already stated in the previous entry (section at the
end: To sum up*
avoid ubuntu packages and install upstream drivers and dependencies*.)
But since it seems not clear enough I have corrected some typos and
added the disclaimer
as requested. I hope Gromacs developper do not feel "angry", this was
not my goal, I am a long
term GNU/Linux contributor and keen to echaustive bug reports. This
article was more a short recipe
to get it working and not a complaint.
I hope the clarifications on the web site are now better, and this it
may help others
in getting a proprely working installation ...
Best,
Stéphane
--
Assistant Professor in BioInformatics, UFIP, UMR 6286 CNRS, Team Protein Design In Silico
UFR Sciences et Techniques, 2, rue de la Houssinière, Bât. 25, 44322 Nantes cedex 03, France
Tél : +33 251 125 636 / Fax : +33 251 125 632
http://www.ufip.univ-nantes.fr/ - http://www.steletch.org
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