[gmx-users] g_helix

[leila salimi]

Dear all,

I have a question regarding to calculate g_helix, I am not sure about the
index numbers for using g_helix!
Should I use the all atom numbers of protein that I have? If not please
explain to me which indexes of protein I have to choose.

The same for do_dssp, I have to use the all atom numbers of protein or the
residue numbers of protein!

Thanks in advance,
Leila