[gmx-users] compile 2016-beta2 failed

Albert mailmd2011 at gmail.com
Fri Jun 17 20:56:09 CEST 2016


HEllo Mark:

Thanks a lot for the reply.

I replied Gromacs with the following command line:

cmake .. -DCMAKE_INSTALL_PREFIX=/home/albert/install/gromacs/2016-beta2 
-DGMX_GPU=ON -DGMX_MPI=ON -DCUDA_TOOLKIT_ROOT_DIR=/opt/common/cuda-7.5

make -j32


But it still failed with messages:

Building NVCC (Device) object 
src/gromacs/CMakeFiles/libgromacs.dir/utility/./libgromacs_generated_cuda_version_information.cu.o
[  1%] Built target view_objlib
[  1%] Built target mdrun_objlib
sh: 1: cicc: not found
sh: 1: cicc: not found
CMake Error at libgromacs_generated_pmalloc_cuda.cu.o.cmake:260 (message):
   Error generating file
/home/albert/Downloads/gromacs-2016-beta2/build/src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/./libgromacs_generated_pmalloc_cuda.cu.o
make[2]: *** 
[src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/./libgromacs_generated_pmalloc_cuda.cu.o] 
Error 1


I don't know what is cicc.....? Do you have any suggestions?

thanks a lot

Albert


On 06/17/2016 08:50 PM, Mark Abraham wrote:
> Hi,
>
> Whatever cicc is, you look like you've changed the environment between when
> you started make and continued it. That's probably unwise. Also you made a
> spelling error in your install prefix, which you probably want to fix.
>
> Mark



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