[gmx-users] compile 2016-beta2 failed

[Mark Abraham]

Hi,

You're going to need to talk to your cluster admin about how to get a
working CUDA compilation setup. Once you have that, GROMACS will compile.

Mark

On Fri, Jun 17, 2016 at 8:56 PM Albert <mailmd2011 at gmail.com> wrote:

> HEllo Mark:
>
> Thanks a lot for the reply.
>
> I replied Gromacs with the following command line:
>
> cmake .. -DCMAKE_INSTALL_PREFIX=/home/albert/install/gromacs/2016-beta2
> -DGMX_GPU=ON -DGMX_MPI=ON -DCUDA_TOOLKIT_ROOT_DIR=/opt/common/cuda-7.5
>
> make -j32
>
>
> But it still failed with messages:
>
> Building NVCC (Device) object
>
> src/gromacs/CMakeFiles/libgromacs.dir/utility/./libgromacs_generated_cuda_version_information.cu.o
> [  1%] Built target view_objlib
> [  1%] Built target mdrun_objlib
> sh: 1: cicc: not found
> sh: 1: cicc: not found
> CMake Error at libgromacs_generated_pmalloc_cuda.cu.o.cmake:260 (message):
>    Error generating file
>
> /home/albert/Downloads/gromacs-2016-beta2/build/src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/./libgromacs_generated_pmalloc_cuda.cu.o
> make[2]: ***
>
> [src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/./libgromacs_generated_pmalloc_cuda.cu.o]
> Error 1
>
>
> I don't know what is cicc.....? Do you have any suggestions?
>
> thanks a lot
>
> Albert
>
>
> On 06/17/2016 08:50 PM, Mark Abraham wrote:
> > Hi,
> >
> > Whatever cicc is, you look like you've changed the environment between
> when
> > you started make and continued it. That's probably unwise. Also you made
> a
> > spelling error in your install prefix, which you probably want to fix.
> >
> > Mark
>
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