[gmx-users] can we constrain a bond?

Mark Abraham mark.j.abraham at gmail.com
Mon Jun 20 13:08:10 CEST 2016


Hi,

There's kinds of bond type that implement such restraints. See chapter five.

Mark

On Mon, 20 Jun 2016 12:26 Albert <mailmd2011 at gmail.com> wrote:

> Hello:
>
> I noticed that we can use genrestr command line to restrain the atom
> position. I am just wondering is there any tools in Gromacs could be
> used for bond restrain? For instance: I would like to introduce some
> force constant for a ion coordinated bond.
>
> Thank you very much
>
> regards
>
> Albert
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