[gmx-users] Protein pore collapse during simulation.

[Yogesh Sharma]

Sir,
 If i want to use charmm gui generated assembly for simulation in gromac
forcefield. How can i extract berger lipid parameters (i.e lipid.itp
according to yout tutorial) corresponding to charmm nomenclature? so that i
can modify my forcefield in accordance.

my ultimate aim is to simulate membrane protein with a ligand. whose
parameters are only available in gromacff (ATB). #ligand contain metalloid
atoms.

*with  regards*
*Yogesh Sharma*