[gmx-users] Gromacs for reverse transformation
shivangi.nangia at gmail.com
Thu May 22 16:32:49 CEST 2014
I want to do a reverse transformation of my system containing: bi-layer,
protein and water.
The Martini website (
http://md.chem.rug.nl/cgmartini/index.php/reverse-transformation) says to
install gromacs version 3.3.1
I am currently using 4.6.1 gromacs version.
ques A: Is this version incapable of the transformation?
Also, the martini website says to:
*"1. Unpack the rev_trans.tar.gz in the MARTINITUTORIAL directory that
contains all necessary gromacs files for this exercise.*
*2. Compile and/or source the modifi ed version of gromacs (remember this
tool is based upon gromacs version 3.3.1 and needs the corresponding tricks
and threats to be compiled.)*
ques B:On performing untar on rev_trans.tar.gz there is no MARTINITUTORIAL
ques C: On performing untar on gmx_rev.tar.gz there is no bin folder
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