[gmx-users] CMake Errors when installing gromacs-5.0.2 with Orca

[Mark Abraham]

Hi,

You've somehow made the normal Gromacs source files missing or
unreadable... start afresh? And use your normal account until you need to
make install?

Mark

On Fri, Nov 7, 2014 at 8:47 PM, Matthew Kelley <
matthewkelley2017 at u.northwestern.edu> wrote:

> Hello,
>
> I'm trying to install gromacs-5.0.2 on our local cluster with Orca using
> CMake 3.0, and I'm running into a few issues. With a cmake command along
> the lines of the following,
>
> cmake .. -DGMX_QMMM_PROGRAM=ORCA -DGMX_BUILD_OWN_FFTW=ON -DGMX_MPI=ON
> -DCMAKE_INSTALL_PREFIX=/my_path/GROMACS-ORCA/ -DCMAKE_CXX_COMPILER=g++
> -DCMAKE_C_COMPILER=gcc
>
> I get errors in the terminal that look like
>
> ----------------------------------------------------------------------------------------------------------------------------
> You have called ADD_LIBRARY for library testutils without any source files.
> This typically indicates a problem with your CMakeLists.txt file
> -- Check if the system is big endian
> -- Searching 16 bit integer
> -- Using unsigned short
> -- Check if the system is big endian - little endian
> -- Looking for inttypes.h
> -- Looking for inttypes.h - found
> CMake Error at src/gromacs/gmxlib/CMakeLists.txt:46 (list):
>   list sub-command REMOVE_ITEM requires two or more arguments.
>
>
> CMake Error at src/gromacs/legacyheaders/CMakeLists.txt:41 (list):
>   list sub-command REMOVE_ITEM requires two or more arguments.
>
>
> CMake Error at src/gromacs/legacyheaders/CMakeLists.txt:42 (list):
>   list sub-command REMOVE_ITEM requires two or more arguments.
>
>
> -- Performing Test HAS_NO_UNUSED_PARAMETER
> -- Performing Test HAS_NO_UNUSED_PARAMETER - Success
> -- Performing Test HAS_NO_DEPRECATED_REGISTER
> -- Performing Test HAS_NO_DEPRECATED_REGISTER - Success
> You have called ADD_LIBRARY for library mdrun_objlib without any source
> files. This typically indicates a problem with your CMakeLists.txt file
> You have called ADD_LIBRARY for library view_objlib without any source
> files. This typically indicates a problem with your CMakeLists.txt file
> -- Configuring incomplete, errors occurred!
>
> ----------------------------------------------------------------------------------------------------------------------------------
>
> I'm not sure what I should be looking for in the log files or if I need to
> fix my CMakeLists.txt file. I am running the cmake command from the
> directory "build" inside the root gromacs-5.0.2 source directory. Please
> let me know what I should do to correct these errors. I can add requisite
> information from the log files if required.
>
> Thank you,
> Matthew
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