[gmx-users] trjconv gets stuck on frame
mark.j.abraham at gmail.com
Mon Oct 27 00:21:26 CET 2014
The output does drop in frequency at some point, so that might be all you
are seeing. Experiment with -b and values around the putative problem area.
On Oct 26, 2014 6:59 PM, "Eric Smoll" <ericsmoll at gmail.com> wrote:
> Hello Gromacs users,
> I have a trajectory file script18_o.trr that I am trying to process. Using
> gmxcheck, this file appears to be complete. When I execute the command
> trjconv -f ../script18/script18_o.trr -s ../script17/script17_o.tpr -o
> tmp1.trr -pbc whole << EOF
> the code moves quickly through the first few hundred frames only to
> consistently get stuck on frame 300...
> trn version: GMX_trn_file (single precision)
> -> frame 320 time 128.000 -> frame 300 time 120.000
> How do I troubleshoot the problem?
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