[gmx-users] hydrogen atom parameter definition for charmm 36

[Nikhil Maroli]

Hi,
i am following this method 
(http://www.sciencedirect.com/science/article/pii/S0010465514002240)

so when i run the script it has to  generate gro file for all the 1000 
pdb's (100ns MD) , inserting *.itp and *.prm files will take lots of time 
for each steps ;) ,i dont have knowledge in perl or python to make a 
script for this .

could you please suggest me any method for this ?!