May 2002 Archives by thread

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Starting: Wed May 1 02:43:37 CEST 2002
Ending: Fri May 31 18:30:00 CEST 2002
Messages: 281

• [gmx-users] Restrained EM and cut-offs   David van der Spoel
• [gmx-users] short and long range coulomb with pme   David van der Spoel
• [gmx-users] Dihedral multiplicity   Anton Feenstra
  • [gmx-users] Dihedral multiplicity   Xavier Periole
• [gmx-users] COM dummy atom and docking   Anton Feenstra
• [gmx-users] Plot data   Anton Feenstra
  • [gmx-users] Plot data   Anton Feenstra
• [gmx-users] short and long range coulomb with pme   Jose D Faraldo-Gomez
  • [gmx-users] short and long range coulomb with pme   David van der Spoel
• [gmx-users] Another shuffling question ..   Marc Baaden
  • [gmx-users] Another shuffling question ..   David van der Spoel
    • [gmx-users] Another shuffling question ..   Marc Baaden
      • [gmx-users] Another shuffling question ..   David van der Spoel
• [gmx-users] genbox   Pedro Alexandre de Araujo Gomes Lapido Loureiro
  • [gmx-users] genbox   David van der Spoel
• [gmx-users] genbox   Pedro Alexandre de Araujo Gomes Lapido Loureiro
• [gmx-users] genbox   David van der Spoel
  • [gmx-users] genbox   Pedro Alexandre de Araujo Gomes Lapido Loureiro
    • [gmx-users] genbox   David van der Spoel
• [gmx-users] genbox II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
• [gmx-users] parameters for unsaturated fatty acids   Shang-Te Danny Hsu
  • [gmx-users] parameters for unsaturated fatty acids   David van der Spoel
• [gmx-users] pressure coupling for lipid bilayer   Shang-Te Danny Hsu
  • [gmx-users] pressure coupling for lipid bilayer   David L. Bostick
    • [gmx-users] Morse potential   Nguyen Hoang Phuong
      • [gmx-users] Morse potential   David van der Spoel
      • [gmx-users] Morse potential   Nguyen Hoang Phuong
      • [gmx-users] Morse potential   David van der Spoel
    • [gmx-users] pressure coupling for lipid bilayer   Erik Lindahl
      • [gmx-users] pressure coupling for lipid bilayer   Anton Feenstra
    • [gmx-users] pressure coupling for lipid bilayer   David van der Spoel
  • [gmx-users] pressure coupling for lipid bilayer   Xavier Periole
    • [gmx-users] pressure coupling for lipid bilayer   Anton Feenstra
      • [gmx-users] pressure coupling for lipid bilayer   Xavier Periole
      • [gmx-users] pressure coupling for lipid bilayer   Erik Lindahl
      • [gmx-users] pressure coupling for lipid bilayer   Xavier Periole
      • [gmx-users] pressure coupling for lipid bilayer   Erik Lindahl
      • [gmx-users] pressure coupling for lipid bilayer   Xavier Periole
    • [gmx-users] pressure coupling for lipid bilayer   Shang-Te Danny Hsu
      • [gmx-users] pressure coupling for lipid bilayer   Anton Feenstra
      • [gmx-users] pressure coupling for lipid bilayer   David van der Spoel
      • [gmx-users] pressure coupling for lipid bilayer   Shang-Te Danny Hsu
      • [gmx-users] pressure coupling for lipid bilayer   Erik Lindahl
• [gmx-users] A question on Berendsen NVT ensemble   Mehmet Suezen
  • [gmx-users] A question on Berendsen NVT ensemble   Lianqing Zheng
    • [gmx-users] A question on Berendsen NVT ensemble   David van der Spoel
• [gmx-users] A question on Berendsen NVT ensemble   Mehmet Suezen
• [gmx-users] mdrun load sharing between dual processor machine   Lynne E. Bilston
  • [gmx-users] mdrun load sharing between dual processor machine   Erik Lindahl
  • [gmx-users] mdrun load sharing between dual processor machine   Oliver Beckstein
    • [gmx-users] mdrun load sharing between dual processor machine   David van der Spoel
• [gmx-users] lipid kit from Marrink!   Shang-Te Danny Hsu
  • [gmx-users] lipid kit from Marrink!   Erik Lindahl
    • [gmx-users] lipid kit from Marrink!   Shang-Te Danny Hsu
      • [gmx-users] lipid kit from Marrink!   Anton Feenstra
• [gmx-users] AMBER (parm96) force field & hydrogen/termini database   Anton Feenstra
  • [gmx-users] AMBER (parm96) force field & hydrogen/termini database   Marc Baaden
  • [gmx-users] Re: [gmx-developers] AMBER (parm96) force field & hydrogen/termini database   Erik Lindahl
• [gmx-users] Restrained MD - lincs error   Mateusz Nowak
• [gmx-users] Installation of Vers. 3.1.3 on IBM RS/6000   Rainer Boeckmann
  • [gmx-users] Installation of Vers. 3.1.3 on IBM RS/6000   Erik Lindahl
    • [gmx-users] Installation of Vers. 3.1.3 on IBM RS/6000   Rainer Boeckmann
  • [gmx-users] Installation of Vers. 3.1.3 on IBM RS/6000   David van der Spoel
    • [gmx-users] Morse potential   Nguyen Hoang Phuong
      • [gmx-users] Morse potential   David van der Spoel
• [gmx-users] addition: Installation of Vers. 3.1.3 on IBM RS/6000   Rainer Boeckmann
• [gmx-users] mdrun_mpi on SGI   Xiaomin luo
  • [gmx-users] mdrun_mpi on SGI   David van der Spoel
• [gmx-users] g_energy and pressure values   McMullen, Roger L
  • [gmx-users] g_energy and pressure values   David van der Spoel
• [gmx-users] Re: AMBER (parm96) force field & hydrogen/termini database   Graham Smith
  • [gmx-users] New force fields   Erik Lindahl
    • [gmx-users] New force fields   Xavier Periole
    • [gmx-users] New force fields   David van der Spoel
    • [gmx-users] New force fields   David L. Bostick
      • [gmx-users] New force fields   David van der Spoel
      • [gmx-users] New force fields   David L. Bostick
    • [gmx-users] New force fields   Ram'on Garc'ia Fern'andez
      • [gmx-users] New force fields   David van der Spoel
      • [gmx-users] New force fields   Ram'on Garc'ia Fern'andez
      • [gmx-users] New force fields   David van der Spoel
      • [gmx-users] New force fields   Ram'on Garc'ia Fern'andez
      • [gmx-users] New force fields   David van der Spoel
      • [gmx-users] New force fields   Ram'on Garc'ia Fern'andez
      • [gmx-users] New force fields   Mehmet Suezen
      • [gmx-users] New force fields   Ram'on Garc'ia Fern'andez
      • [gmx-users] New force fields   Mehmet Suezen
      • [gmx-users] New force fields   Mehmet Suezen
      • [gmx-users] New force fields   Erik Lindahl
      • [gmx-users] New force fields   Ram'on Garc'ia Fern'andez
      • [gmx-users] New force fields   Mehmet Suezen
      • [gmx-users] New force fields   Ram'on Garc'ia Fern'andez
      • [gmx-users] New force fields   Erik Lindahl
• [gmx-users] shuffle/sort   Bert de Groot
• [gmx-users] Amber6.0 -> GROMACS3.1 ?   Wolfgang Zocher
  • [gmx-users] Amber6.0 -> GROMACS3.1 ?   David van der Spoel
    • [gmx-users] Amber6.0 -> GROMACS3.1 ?   Wolfgang Zocher
      • [gmx-users] Amber6.0 -> GROMACS3.1 ?   Erik Lindahl
      • [gmx-users] SiO2 simulation again.   Lianqing Zheng
      • [gmx-users] SiO2 simulation again.   Mehmet Suezen
      • [gmx-users] SiO2 simulation again.   David van der Spoel
      • [gmx-users] SiO2 simulation again.   Lianqing Zheng
      • [gmx-users] SiO2 simulation again.   David van der Spoel
      • [gmx-users] Amber6.0 -> GROMACS3.1 ?   David van der Spoel
• [gmx-users] multiple structure .pdb files   Attila Borics
  • [gmx-users] multiple structure .pdb files   David van der Spoel
• [gmx-users] [v3.1.3] Failed to create Makefile   Meng-Juei Hsieh
  • [gmx-users] [v3.1.3] Failed to create Makefile   Erik Lindahl
    • [gmx-users] [v3.1.3] Failed to create Makefile   Meng-Juei Hsieh
      • [gmx-users] [v3.1.3] Failed to create Makefile   Meng-Juei Hsieh
      • [gmx-users] [v3.1.3] Failed to create Makefile   David van der Spoel
    • [gmx-users] Nose-Hoover NPT ensemble problem   Lianqing Zheng
      • [gmx-users] Nose-Hoover NPT ensemble problem   David van der Spoel
      • [gmx-users] Arithmetic Exception (core dumped)   Lianqing Zheng
      • [gmx-users] Arithmetic Exception (core dumped)   David van der Spoel
      • [gmx-users] Arithmetic Exception (core dumped)   Lianqing Zheng
• [gmx-users] free energy calculation   Alessandra Villa
• [gmx-users] (no subject)   ernesto at biof.ufrj.br
  • [gmx-users] no forces from g_traj   Oliver Beckstein
• [gmx-users] scaling   Lynne E. Bilston
  • [gmx-users] scaling   David van der Spoel
• [gmx-users] grompp question   Y. U. Sasidhar
  • [gmx-users] grompp question   David van der Spoel
• [gmx-users] constarint algorithm   Dmitry Kovalsky
  • [gmx-users] constarint algorithm   David van der Spoel
• [gmx-users] Phosphorylated Amino Acids   Graham Smith
• [gmx-users] LJ14 parameters   Xavier Periole
  • [gmx-users] LJ14 parameters   David van der Spoel
• [gmx-users] compilation trouble in OSX   rams at poori.biochem.uiowa.edu
  • [gmx-users] compilation trouble in OSX   Meng-Juei Hsieh
    • [gmx-users] compilation trouble in OSX   David van der Spoel
      • [gmx-users] compilation trouble in OSX   Meng-Juei Hsieh
  • [gmx-users] compilation trouble in OSX   Erik Lindahl
• [gmx-users] vacuum force field?   bxiong
  • [gmx-users] vacuum force field?   David van der Spoel
• [gmx-users] Re: workload gromacs on dual processor   Erik Lindahl
• [gmx-users] compilation trouble in OSX   nicolis at guideo.fr
  • [gmx-users] compilation trouble in OSX   rams at poori.biochem.uiowa.edu
    • [gmx-users] compilation trouble in OSX   Meng-Juei Hsieh
• [gmx-users] Re: gmx-users digest, Vol 1 #247 - 6 msgs   Lynne E. Bilston
• [gmx-users] MPIRUN   Chandrasekar Ramamoorthy
  • [gmx-users] MPIRUN   Mehmet Suezen
    • [gmx-users] pairs in ffgmx.rtp   jozef hritz
      • [gmx-users] pairs in ffgmx.rtp   Anton Feenstra
      • [gmx-users] pairs in ffgmx.rtp   jozef hritz
      • [gmx-users] pairs in ffgmx.rtp   Anton Feenstra
  • [gmx-users] MPIRUN   Alan Wilter Sousa da Silva
• [gmx-users] g_tcaf   Mehmet Suezen
• [gmx-users] Re: Phosphorylated Amino Acids   Graham Smith
• [gmx-users] Force   Dmitry Kovalsky
• [gmx-users] Question PME+charged groups   ehab at biof.ufrj.br
  • [gmx-users] Question PME+charged groups   David van der Spoel
    • [gmx-users] Question PME+charged groups   Erik Lindahl
• [gmx-users] Gromacs on dual athlons   jfuchser
  • [gmx-users] Gromacs on dual athlons   Anton Feenstra
• [gmx-users] Charge groups II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
  • [gmx-users] Charge groups II   Anton Feenstra
• [gmx-users] Cannot compile gromacs-localp-3.0.2   Alan Wilter Sousa da Silva
  • [gmx-users] Cannot compile gromacs-localp-3.0.2   Erik Lindahl
    • [gmx-users] Cannot compile gromacs-localp-3.0.2   Alan Wilter Sousa da Silva
• [gmx-users] (no subject)   ehab at biof.ufrj.br
  • [gmx-users] (no subject)   David van der Spoel
• [gmx-users] Re: Charge groups II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
  • [gmx-users] Re: Charge groups II   David van der Spoel
    • [gmx-users] Re: Charge groups II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
      • [gmx-users] Re: Charge groups II   David van der Spoel
      • [gmx-users] Re: Charge groups II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
      • [gmx-users] Re: Charge groups II   David van der Spoel
      • [gmx-users] Re: Charge groups II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
      • [gmx-users] Re: Charge groups II   David van der Spoel
      • [gmx-users] Re: Charge groups II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
  • [gmx-users] Re: CHARGES AN LJ14 PARAMETERS   Marc A Ceruso
    • [gmx-users] Re: CHARGES AN LJ14 PARAMETERS   David van der Spoel
• [gmx-users] Surface tension   emombel at nimr.mrc.ac.uk
  • [gmx-users] Surface tension   Erik Lindahl
• HEME A and Re: [gmx-users] modeling unnatural amino acids   Markus O Kaukonen
• [gmx-users] Fatal error: ci = -2147483648   Pandini Alessandro - Dottorati di Ricerca
  • [gmx-users] Fatal error: ci = -2147483648   David van der Spoel
• [gmx-users] Trajectory analysis tools.   A.Madhumalar
  • [gmx-users] Trajectory analysis tools.   David van der Spoel
• [gmx-users] Re: Charge groups II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
  • [gmx-users] Re: Charge groups II   David van der Spoel
    • [gmx-users] Re: Charge groups II   Pedro Alexandre de Araujo Gomes Lapido Loureiro
• [gmx-users] PDB file problems   Senthil Kandasamy
  • [gmx-users] PDB file problems   Erik Lindahl
• [gmx-users] EDITCONF question   Senthil Kandasamy
  • [gmx-users] EDITCONF question   David L. Bostick
    • [gmx-users] EDITCONF question   David L. Bostick
    • [gmx-users] EDITCONF question   Xavier Periole
• [gmx-users] scaling summary   Lynne E. Bilston
• [gmx-users] (no subject)   许 叶春
• [gmx-users] Interactive GLU selection and dihedrals   Ivano Eberini
  • [gmx-users] Interactive GLU selection and dihedrals   David van der Spoel
    • [gmx-users] Interactive GLU selection and dihedrals   Ivano Eberini
      • [gmx-users] Interactive GLU selection and dihedrals   David van der Spoel
• [gmx-users] system size vs box size   Senthil Kandasamy
  • [gmx-users] system size vs box size   Anton Feenstra
• [gmx-users] Interactive GLU selection and dihedrals   Ivano Eberini
• [gmx-users] anisotropic B   rams at poori.biochem.uiowa.edu
  • [gmx-users] anisotropic B   David van der Spoel
    • [gmx-users] anisotropic B   rams at poori.biochem.uiowa.edu
• [gmx-users] Re: B-factor?   David van der Spoel
• [gmx-users] charged systems   Elisabetta Gianazza
• [gmx-users] aqueous 1-propanol potentials for GMX?   Ed Castner
  • [gmx-users] aqueous 1-propanol potentials for GMX?   David van der Spoel
• [gmx-users] error compiling on MacOSX   Valentin Gogonea
  • [gmx-users] error compiling on MacOSX   Erik Lindahl
    • [gmx-users] error compiling on MacOSX   rams at poori.biochem.uiowa.edu
      • [gmx-users] error compiling on MacOSX   Erik Lindahl
      • [gmx-users] error compiling on MacOSX   rams at poori.biochem.uiowa.edu
• [gmx-users] Hard Drive Speed   Donald E. Elmore
  • [gmx-users] Hard Drive Speed   Erik Lindahl
• [gmx-users] error compiling on MacOSX   Valentin Gogonea
  • [gmx-users] error compiling on MacOSX   rams at poori.biochem.uiowa.edu
    • [gmx-users] error compiling on MacOSX   Erik Lindahl
      • [gmx-users] error compiling on MacOSX   rams at poori.biochem.uiowa.edu
      • [gmx-users] compiling gromacs 3.1.3 on MacOSX   Valentin Gogonea
      • [gmx-users] compiling gromacs 3.1.3 on MacOSX   David van der Spoel
      • [gmx-users] compiling gromacs 3.1.3 on MacOSX   Valentin Gogonea
      • [gmx-users] compiling gromacs 3.1.3 on MacOSX   rams at poori.biochem.uiowa.edu
      • [gmx-users] compiling gromacs 3.1.3 on MacOSX   Valentin Gogonea
      • [gmx-users] compiling gromacs 3.1.3 on MacOSX   Erik Lindahl
      • [gmx-users] gromacs 3.1.3 on MacOSX   Valentin Gogonea
      • [gmx-users] gromacs 3.1.3 on MacOSX   Meng-Juei Hsieh
      • [gmx-users] gromacs 3.1.3 on MacOSX   Erik Lindahl
      • [gmx-users] compiling gromacs 3.1.3 on MacOSX   nicolis at guideo.fr
• [gmx-users] c preprocessor   Valentin Gogonea
  • [gmx-users] c preprocessor   Erik Lindahl
• [gmx-users] running grompp   Valentin Gogonea
  • [gmx-users] running grompp   Erik Lindahl
  • [gmx-users] running grompp   David van der Spoel
• [gmx-users] Energy   Adriano V. Werhli
  • [gmx-users] Energy   David van der Spoel
• [gmx-users] A likely problem with ffgmx2.rtp   Ivano Eberini
  • [gmx-users] A likely problem with ffgmx2.rtp   Anton Feenstra
• [gmx-users] XTC error   Vincent Lemaitre
  • [gmx-users] XTC error   David van der Spoel
• [gmx-users] QM/MM   hagop demirdjian
  • [gmx-users] QM/MM   Gerrit Groenhof
• [gmx-users] fitting   rams at poori.biochem.uiowa.edu
  • [gmx-users] fitting   David L. Bostick
  • [gmx-users] fitting   Erik Lindahl
  • [gmx-users] fitting   David van der Spoel
    • [gmx-users] fitting   rams at poori.biochem.uiowa.edu
      • [gmx-users] fitting   David van der Spoel
      • [gmx-users] fitting   rams at poori.biochem.uiowa.edu
      • [gmx-users] fitting   David van der Spoel
  • [gmx-users]    giacomo de mori
    • [gmx-users]    David van der Spoel
• [gmx-users] look into tpr   Valentin Gogonea
• [gmx-users] LJ parameters   Valentin Gogonea
  • [gmx-users] LJ parameters   Erik Lindahl
    • [gmx-users] LJ parameters   Valentin Gogonea
      • [gmx-users] LJ parameters   Erik Lindahl
• [gmx-users] for continue the simulation   xu yechun
  • [gmx-users] for continue the simulation   Erik Lindahl
• [gmx-users] g_helix   Richard Filmer
  • [gmx-users] g_helix   David van der Spoel
• [gmx-users] long simulation   Dmitry Kovalsky
  • [gmx-users] long simulation   David van der Spoel
• [gmx-users] shuffle/sort problem   Lynne E. Bilston
  • [gmx-users] shuffle/sort problem   David van der Spoel
• [gmx-users] g_dipoles   Rainer Boeckmann
• [gmx-users] g_dipoles (2)   Rainer Boeckmann
  • [gmx-users] g_dipoles (2)   David van der Spoel
  • [gmx-users] normal mode analysis   Nguyen Hoang Phuong
    • [gmx-users] normal mode analysis   Bert de Groot
• [gmx-users] Glucose parameters?   Yuguang Mu
• [gmx-users] can the GROMACS transform the amber trajectory to GROMACS trajectory?   bxiong
  • [gmx-users] can the GROMACS transform the amber trajectory to GROMACS trajectory?   David van der Spoel
• [gmx-users] can the GROMACS transform the amber trajectory to GROMACS   Nguyen Hoang Phuong
• [gmx-users] MacOSX-segmentation fault   Valentin Gogonea
• [gmx-users] Gromacs Installation on HP problems   BONINI at ICIL64.CILEA.IT
• [gmx-users] error in mdrun   Luke Czapla
  • [gmx-users] error in mdrun   David van der Spoel
• [gmx-users] gromacs 3.1.3 on MacOSX   Valentin Gogonea
• [gmx-users] about water molecules in popc   Xu Yong
• [gmx-users] about water molecules in popc   Jose D Faraldo-Gomez
  • [gmx-users] about water molecules in popc   Erik Lindahl
• [gmx-users] mdrun_hole   Jose D Faraldo-Gomez
  • [gmx-users] mdrun_hole   Xavier Periole

Last message date: Fri May 31 18:30:00 CEST 2002
Archived on: Thu Nov 14 11:59:36 CET 2013

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